FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSATH357.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSATH357.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6390
Sequences flagged as poor quality0
Sequence length301
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGT267841.90923317683881No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT218634.20970266040689No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT2053.2081377151799684No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT2043.1924882629107985No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT951.486697965571205No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT450.7042253521126761No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT380.5946791862284819No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT230.35993740219092335No Hit
CGGCTGCGTTCTTCATCGATGCAGGAGCCAAGAGATCCGTTGTTAAAAGT220.3442879499217527No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAGAGT170.26604068857589985No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGGGATCCGTTGTTGAAAGT140.2190923317683881No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTGAAAGT140.2190923317683881No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT130.20344287949921755No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTCGTTGAAAGT120.18779342723004694No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAGGT120.18779342723004694No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGGTCCGTTGTTGAAAGT110.17214397496087636No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT110.17214397496087636No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT110.17214397496087636No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT100.1564945226917058No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTGAAAGT100.1564945226917058No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGCTGTTGAAAGT100.1564945226917058No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT100.1564945226917058No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT100.1564945226917058No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGGAAGT90.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTCGAAAGT90.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAGGAGATCCGTTGTTGAAAGT90.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT90.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGCAAGT90.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGACCCGTTGTTGAAAGT90.14084507042253522No Hit
CGGCTGCGTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT80.12519561815336464No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT80.12519561815336464No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT80.12519561815336464No Hit
CGGCTGCGTTCTTCATCGATGCAGGAGCCAAGAGATCCGTTGTTGAAAGT80.12519561815336464No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT80.12519561815336464No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT80.12519561815336464No Hit
CGGCTGCGTTCTTCATCGATGCTGGGACCAAGAGATCCGTTGTTGAAAGT80.12519561815336464No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTAAAAGT70.10954616588419405No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGACAGT70.10954616588419405No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGACAGT70.10954616588419405No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT70.10954616588419405No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC70.10954616588419405No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGC70.10954616588419405No Hit
CGGTTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGT70.10954616588419405No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)