FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSATH305.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSATH305.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6461
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT210632.59557344064387No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT167325.893824485373777No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT5438.404271784553474No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT2343.6217303822937628No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT2193.3895681783005727No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT2083.2193158953722336No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT2073.203838415106021No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT901.3929732239591395No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT681.052468658102461No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTAAAAGT430.6655316514471444No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT190.2940721250580406No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT150.2321622039931899No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGC150.2321622039931899No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGCTAAAAGT140.21668472372697722No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCAAAAGT140.21668472372697722No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGCTAAAAGT140.21668472372697722No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAACGT140.21668472372697722No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTACAAGT140.21668472372697722No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGCTAAAAGT130.2012072434607646No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGCTAAAAGT130.2012072434607646No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCATTGTTGAAAGT130.2012072434607646No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTAAAAGT120.18572976319455192No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGCTAAAAGT120.18572976319455192No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT110.17025228292833927No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAACAGT110.17025228292833927No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAGGT110.17025228292833927No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCTTTGCTAAAAGT110.17025228292833927No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAGAAGT100.1547748026621266No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTGAAAGT100.1547748026621266No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGCTAAAAGT100.1547748026621266No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGGAAGT90.13929732239591394No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCTGTTGCTAAAAGT90.13929732239591394No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGCTAAAAGT90.13929732239591394No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAGGT90.13929732239591394No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGCTAAAAGT80.12381984212970129No Hit
CGGCTGCGTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGTT80.12381984212970129No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGCTAAAAGT80.12381984212970129No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGCTAAAAGT70.10834236186348861No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCACTGTTGAAAGT70.10834236186348861No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCATTGTTGAAAGT70.10834236186348861No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGTCAAGAGATCCATTGTTGAAAGT70.10834236186348861No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATCGTTGAAAGT70.10834236186348861No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)