FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSATH291.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSATH291.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT8354.966887417218544No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC4127.1523178807947No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA85.298013245033113No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT21.3245033112582782No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGACAGT10.6622516556291391No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT10.6622516556291391No Hit
TGAGTACCCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.6622516556291391No Hit
CGGCTGCGTTCTTCATCAATGCGAGTTTCTTCCTCTAAATGAACAAGACC10.6622516556291391No Hit
CGGCTGCGTTCTTCATCGATGCCGGGACCAAGAGATCCGTTGTTGAAAGT10.6622516556291391No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT10.6622516556291391No Hit
TGAGTAACCGCAACATCGTCAAAACACAGTTATCCATACTAGTTAGAGAA10.6622516556291391No Hit
TGAGTAACCTCAACATAGTGAAAACACCGTTATCCATACTAGTTAGAGAA10.6622516556291391No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGA10.6622516556291391No Hit
CGGCTGCGTTCTTCCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT10.6622516556291391No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC10.6622516556291391No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTTCTAAATGACCAAGCC10.6622516556291391No Hit
TGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.6622516556291391No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATTCGTTGTTGAAAGT10.6622516556291391No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTGCTTCCTCTAAATGACCAAGCCC10.6622516556291391No Hit
TGAGTAACCGCAACATAGTGAAAACACATTTATCCATACTAGTGAGAGAA10.6622516556291391No Hit
TGAGTAACCGCAACATAGTGTTGTCGACGCTGACTCATCCTGTCTCTTAT10.6622516556291391No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)