FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve918.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve918.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences630
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT10817.142857142857142No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10216.19047619047619No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC6510.317460317460316No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT477.4603174603174605No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT284.444444444444445No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC213.3333333333333335No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT172.6984126984126986No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT142.2222222222222223No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC132.0634920634920633No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT111.746031746031746No Hit
AGCCTAGACATCCACTGCTGTGGTCGGTGTGGTAATGATCCTTCCGCTGT101.5873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.9523809523809524No Hit
AGCCTAGACATCCACTGCTGCGGTGGTAATGATCCTTCCGCTGTCTCTTA50.7936507936507936No Hit
AGCCTAGACATCCACTGCTGCTCGGAGATGTGGTAATGATCCTTCCGCTG50.7936507936507936No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGTAATGATCCTTCCGCTGTC50.7936507936507936No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC40.6349206349206349No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC40.6349206349206349No Hit
TGAGTAACCGCAACATAGTTCGACGCTGACTCATCCTGTCTCTTATACAC30.4761904761904762No Hit
AGCCTAGACATCCACTGCTGGAGATGTGGTAATGATCCTTCCGCTGTCTC30.4761904761904762No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA30.4761904761904762No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTA30.4761904761904762No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT30.4761904761904762No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT20.31746031746031744No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.31746031746031744No Hit
AGCCTAGACATCCACTGCTGTCTTTGGTAATGATCCTTCCGCTGTCTCTT20.31746031746031744No Hit
AGCCTAGACATCCACTGCTGCAGACGGTGGTAATGATCCTTCCGCTGTCT20.31746031746031744No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGGCTCGGAGATGTGGTAATG20.31746031746031744No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.31746031746031744No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGATGTGGTAATGAT20.31746031746031744No Hit
TGAGTAACCGCAACATCGACGCTGACTCATCCTGTCTCTTATACACATCT20.31746031746031744No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGAATAAAAGCAGAGAC20.31746031746031744No Hit
TGAGTAACCGCTGACTCATCCTGTCTCTTATACACATCTGACGCTGCCGA20.31746031746031744No Hit
AGCCTAGACATCCACTGCTGTGTGGTACTGATCCTTCCGCTGTCTCTTAT20.31746031746031744No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT20.31746031746031744No Hit
AGACTAGACATCCACTGCTGCTCGGAGATGTGGTAATGATCCTTCCGCTG10.15873015873015872No Hit
TACCTTTCGCCATCACCTAACTATTCAGTAAGAAAATGACGCGTTGGATG10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAGACGCAAAAACTTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTAAAAGCAGGCACTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTTATGATGCTTCCGCAGTCGCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCGCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCAACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC10.15873015873015872No Hit
AGCCTAGACCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.15873015873015872No Hit
AGCCTAGACATCAACTGATTTGTGGTAATGATCCTTCCGCTGTCTCTTAT10.15873015873015872No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGAATAAAAGCAGAGAC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGGTCCTTCCGCTGTCTCTTAT10.15873015873015872No Hit
AGCCTACACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.15873015873015872No Hit
AGCCTAGACATCCAATGCTGTCACGTGGTAATGAACCTTCTGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATTCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAAGATCC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTTTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAAGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
TCTCGCAAGTATGCTGGGAGACAGGATTGTATAAGGTTACTTTATATGTC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTTCCGACGGTGGTAATGATCCTTCCGCTGTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGACTCGTGGTAATGATGCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTCGTGATAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
ACTCCGTGAAAACCACCCGATACCTTATAGGCGCTGTTCTCGAACTTGCC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATAATCCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGCCGACGGTAGTAATGATCCTTCCGCTGTCT10.15873015873015872No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGACT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTACCGCTGTCTCTTAT10.15873015873015872No Hit
ACCCGCAGACCACCACGATACGTACGAACCAGTTGATACACACACAACAC10.15873015873015872No Hit
CTTCTTTTGTGGCTTTTTCCATTTCTACTCTTTATCGTTTTCCTTTACTT10.15873015873015872No Hit
CACACAAATTCCCATGCGACAGTATTAATTGATATATAGATTCCTACACC10.15873015873015872No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCCAGTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
TGAGTAACCGCAACATAGTACACTCTTTCCCTACACGACGCTGACTCATC10.15873015873015872Illumina Single End PCR Primer 1 (96% over 25bp)
CCCCCTTTTCCTTCCTCTCATCCCTTTTTCTTTTCTCCTTCTTATATTCC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTCCCGACGGTGGTAATGATCCTTCCGCTGTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGCCTAGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
TCTAGTGGGAGGCATTTGTGGAGGGATGTGTAAGAGAGTGTTCCGTCGCG10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCGCTGTTTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGATGTGTGGTAATGATCCTTCCGCTGTCTCTTAT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGAATAAAAGCAGAGAC10.15873015873015872No Hit
TCACAATTATTGCAGGGGGTAGGAGGATGAGTGTTGAAGTTGCTTTGTGC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTTTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATACAAGCAGAGAC10.15873015873015872No Hit
CGGCTGCGTTCTTCCTCGATGCCAGAACCCAGAGCTCCGTTGTTGACAGT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT10.15873015873015872No Hit
AGCCTAGACATCCATTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
CCACCATTTATTCATCCTGTTCCATAGTAACTATTCTCTTTGTCCATTCC10.15873015873015872No Hit
CGCCTAGTCATCTATGCATGCAATTTTGTGGTAGTCATCTCACACCCACT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAGGCAGGGACTT10.15873015873015872No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATGATCCTTCCGCTGTCTC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTAGTTATCTAGTTAAAAGCAGAGACT10.15873015873015872No Hit
AGCCTAGACTCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGATGTGTATAAGAGACAGTGGTAATGATCCT10.15873015873015872No Hit
TGAGTAACCGTAATATCTGTTCGACGCTGACTCATCCTGTCTCTTATACA10.15873015873015872No Hit
TGAGTAACCGCAACATATGTTCGACGCTGACTCATCCTGTCTCTTATACA10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCAGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGGTCGGAGATGTGGTAATGATC10.15873015873015872No Hit
TATCCCGACATCCACACTTCTTTATTACACTTGTATGCAAGCTACATATC10.15873015873015872No Hit
AGCCTAGAAATCCACTGCTGTCTGTGGTAATGATCCTTCAGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCGTAT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCCCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCGTTCCGCTGTCTC10.15873015873015872No Hit
TGAGTAACCGCAACATAGTGACACTCTTTCCCTACACGATGCTGACTCAT10.15873015873015872Illumina Single End Sequencing Primer (95% over 23bp)
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTACGCTGTCTCT10.15873015873015872No Hit
AGCTTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCGGAGAC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGAATAACAGCAGAGAC10.15873015873015872No Hit
AGCCTAGAAATCCCCCGCTGTCTGTGGGTATGATTCTTTCTTTGTCTCTT10.15873015873015872No Hit
CGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT10.15873015873015872No Hit
AGCTTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCTGCTGTCTCTTATAA10.15873015873015872No Hit
AGCCTAGACATCCACTGCTATCTGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
TGATTACCCGCAACATCGACGCTGACTCATCCTGTCTCTTATACACATCT10.15873015873015872No Hit
AGCCTAGATATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
TGAGTAACCGCAACATAGTGACTCATCCTGTCTCTTATACACATCTGACG10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACCT10.15873015873015872No Hit
CGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT10.15873015873015872No Hit
ATCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTGTAGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGGTCTCATGGGCTCGGAGATGTGGTAATGAT10.15873015873015872No Hit
TTACAATTACTATCGTGTCTGACCTTAGCAGGTTCTATCTTGTACTCCCC10.15873015873015872No Hit
AGCCTAGACATCCATTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATTCACTGCTGGTGTCTCGTGGGCTCGGAGATGTGGTAATG10.15873015873015872No Hit
AGCCAAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCATTCC10.15873015873015872No Hit
TATAGATTCTCTTGTTGACATTTTCAAATAGCGTTGATTACTCTCTGATT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTCCGCTGTCTCTTA10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGAC10.15873015873015872No Hit
CAGAGGAATTCTGGTAGTCGCGAGTAAGAGAGTATATGAGTGAGTGTTGG10.15873015873015872No Hit
AGGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
TCATGATTATTTTGACTATTTTATGACTCTGTATTGCAGCTTTAGCTTTT10.15873015873015872No Hit
AGCCTAGACATCCACTCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCAAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTATCTGTGGTAATGATCCTTCCGCTGTGTCTT10.15873015873015872No Hit
TGAGTAACCGCAACATAGTGAGCTGACTCATCCTGTCTCTTATACACATC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGGCTC10.15873015873015872No Hit
AGCCTAGACATCCACTGTTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGCTCGGAGATGTGGTAATGATCCTTCCGCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT10.15873015873015872No Hit
AGTCTAGATACTTACTGCCTTCCCGTGGTAATGATACTTATGCTGTCCCT10.15873015873015872No Hit
AGCCTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCACAGAC10.15873015873015872No Hit
GCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGTCCTTCCGCTGTCTCTT10.15873015873015872No Hit
TGAGTAACCGCAACATAGTGACGCTGACTCATCCTGTCTCTTATACACAT10.15873015873015872No Hit
AGCCTAGACATCCATTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT10.15873015873015872No Hit
ACCCCATGCAGTCCGCCAGACACCTTGTAGGCATTGTCGTCCGATGTGTT10.15873015873015872No Hit
AGCCTAGACATTTACTGCTGCCGATGGTGGTAATGATCCTTCCGCTGTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTCATGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGATGTGTATAAGAGACAGAGCCTAGATATCC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGACAGTTTGTGGAAGTAACCGCAAAAACTTT10.15873015873015872No Hit
AGCCTAGACATCCACAGCTGTCTGTGGTAATGATTCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCAACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGCAGAGAC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCCCT10.15873015873015872No Hit
TCAACATGATCTTGATTAGTGGAATTAGTTAGCGTCAATGCTCAGCTAGT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATACTTCCGCTGTCTCTTAT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGGAGATGTGGTAATGATCCTTCCGCTGTATC10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTTTCTTAT10.15873015873015872No Hit
TAGCCGCGTTCTTAATCTATTCGAGAGTCTAGAGATCCGTCGGTATCCTT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGGCTCCGAGATGTGGTAATG10.15873015873015872No Hit
AGCCTAGACATCAACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.15873015873015872No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCC10.15873015873015872No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGACT10.15873015873015872No Hit
ACCCCATGCAAGCCACCCGCGACATTGTACTCATCATCGTCATCATTGTT10.15873015873015872No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)