FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve903.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve903.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1836
Sequences flagged as poor quality0
Sequence length301
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT105357.35294117647059No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT1578.55119825708061No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT1578.55119825708061No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT372.0152505446623095No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT351.906318082788671No Hit
AGCCTAGACATCCACTGCTGTTCGTGGTAATGATCCTTCCGCTGTCTCTT211.1437908496732025No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC160.8714596949891068No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC160.8714596949891068No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT90.49019607843137253No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT90.49019607843137253No Hit
AGCCTAGACATCCACTGCTGTGGGCTCGGAGATGTGGTAATGATCCTTCC80.4357298474945534No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT70.3812636165577342No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT70.3812636165577342No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT70.3812636165577342No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTAAGAGCAAGGACTT70.3812636165577342No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT60.32679738562091504No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT60.32679738562091504No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAGAGCAAGGACTT60.32679738562091504No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT60.32679738562091504No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGACCAAGGACTT50.27233115468409586No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGCCTT50.27233115468409586No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAGAGCAAGGACTT50.27233115468409586No Hit
AGCCTAGACATCCACTGCTGTAAGTTGTTATCTAGTAAGAGCAAGGACTT40.2178649237472767No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT40.2178649237472767No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCGAGGACTT40.2178649237472767No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC40.2178649237472767No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGGCTT40.2178649237472767No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATACAAGCAAGGACTTT30.16339869281045752No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGAAGCAAGGACTT30.16339869281045752No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTAAATAAAAGCAAGGACTTT30.16339869281045752No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGAAAGGACTT30.16339869281045752No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGTAAGAGCAAGGACTT30.16339869281045752No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT30.16339869281045752No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT30.16339869281045752No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAAAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATCTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTGGTTATCTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGATTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGAACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTATCTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGACCTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAATAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATCAAAGCAAGGACTTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAACAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTCGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
ACGCCGTGGAGGCCTCCAGACACTTTGTAGCTGTTGTCATCGAACTTGCC20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATCTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT20.10893246187363835No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCGAGGACTTT20.10893246187363835No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTTAGTAAGAGCAAGGACTT20.10893246187363835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAGAGCAAGGACTT20.10893246187363835No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)