FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve853.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve853.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3956
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT266067.23963599595551No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT46111.653185035389283No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT1132.8564206268958543No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT1062.679474216380182No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT260.6572295247724975No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT230.5813953488372093No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGCCTT160.40444893832153694No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT130.32861476238624876No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC130.32861476238624876No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT130.32861476238624876No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC120.3033367037411527No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACCT120.3033367037411527No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT120.3033367037411527No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT100.2527805864509606No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT90.2275025278058645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT90.2275025278058645No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT90.2275025278058645No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT90.2275025278058645No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT80.20222446916076847No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAAAGCAAGGACTT70.1769464105156724No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAAAGCAAGGACTT70.1769464105156724No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT70.1769464105156724No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT70.1769464105156724No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAAAGCAAGGACTT70.1769464105156724No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAAAGCAAGGACTT60.15166835187057634No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGAAGCAAGGACTT60.15166835187057634No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAAAGCAAGGACTT60.15166835187057634No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCACGGACTT60.15166835187057634No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGTAAAAGCAAGGACTT60.15166835187057634No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.1263902932254803No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT50.1263902932254803No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT50.1263902932254803No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAAAGCAAGGACTT50.1263902932254803No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAAAGCAAGGACTT50.1263902932254803No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT50.1263902932254803No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.1263902932254803No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGAATT50.1263902932254803No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAAAGCAAGGACTT50.1263902932254803No Hit
AGCCTAGACATCCACTGCCGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.10111223458038424No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTCAAAGCAAGGACTT40.10111223458038424No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.10111223458038424No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAAAGCAAGGACTT40.10111223458038424No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTT40.10111223458038424No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATCAAAAGCAAGAATT40.10111223458038424No Hit
AGCCTAGACACCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.10111223458038424No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.10111223458038424No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCGAGGACTT40.10111223458038424No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)