FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve849.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve849.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT3231.06796116504854No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC1413.592233009708737No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT65.825242718446602No Hit
AGCCTAGACATCCACTGCTGCAGTGGTAATGATCCTTCCGCTGTCTCTTA43.8834951456310676No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA32.912621359223301No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC21.9417475728155338No Hit
AGCCTAGACATCCACTGCTGTCGCGGCCTCAGGTGGTAATGATCCTTCCG21.9417475728155338No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA21.9417475728155338No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT21.9417475728155338No Hit
TGAGTAACCGCACCATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA21.9417475728155338No Hit
AGCCTAGACATCCACTGCTGGGCACGTCAGATGTGGTAATGATCCTTCCG21.9417475728155338No Hit
AGCCTAGACATCCACTGCTGGGTGGTAATGATCCTTCCGCTGTCTCTTAT21.9417475728155338No Hit
AGCCTAGACATCCACTGCTGTCGCGCACGTCAGATGTGGTAATGATCCTT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTTCGCTGTC10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGACGACGACGTGGTAATGATCCTTCAGCTGT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGCGTCAGATGTGGTAATGATCCTTCCGCTGT10.9708737864077669No Hit
ACCCTAGACATCCACTGCTGCAGTGGTAATGATCCTTCCGCTGTCTCTTA10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGCAGCGTCAGTGGTAATGATCCTTCCGCTGT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGCGGACGAGTGGTAATGATCCTTCCGCTGTC10.9708737864077669No Hit
AGCCTAGACATCCACTGTTGGGTGGTAATGATCCTTCCGCTGTCTCTTAT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGTAGCCAGCGTCAGATGTGGTAATGATCCTT10.9708737864077669No Hit
AGCCTAGACACCCACTGCTGACGCTGCCGACGACGTGGTAATGATCCTTC10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGGTAATGATCCTTCCGCTGTCTCTTATACAC10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGGATGGTAATGATCCTTCCGCTGTCTCTTAT10.9708737864077669No Hit
TGAGTAACCGCAACATCGTGAAAACACCGTTATCCATACTAGTTAGAGAA10.9708737864077669No Hit
TGAGTACCCGCAACATAGTGAAAACACAGTTATCCATACCAGTTAGAGAA10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTGTACATAAAAGCAAGGACTTT10.9708737864077669No Hit
AGCCTAGACATCAACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGGGTGGTAATGATCCTTCCGCTGTCCCTTAT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC10.9708737864077669No Hit
ACCCCGTGTCAGCCTCCCTACACCACGAAATAGTACTAGTAGCACTTGCC10.9708737864077669No Hit
AGCCTAGACATCCGCTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.9708737864077669No Hit
TATGATAATTCGGTCAATACAAGAGTGAATAAAGTGCATTCGAATACTGT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGTCGGCAGCTCAGATGTGTTAATGATCCTTC10.9708737864077669No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGCCGACGACGAGGTAATGATCCTTCCGCTGT10.9708737864077669No Hit
AAACATATTTTTTCCTGTGCTGTCATGTCACAGCAGTATATTATGGTGTT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGACGCGGTAATGATCCTTC10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGGGTGGTAATGATCCTTCCGCTGTCGCTTAT10.9708737864077669No Hit
AGCCTAGACATCCACTGCTGCCGAAGACGTGGTAATGATCCTTCCGCTGT10.9708737864077669No Hit
ACACCGTGTAGGCCTCCCGAGACCTTGTAGGAGTTCTGGTCGAACTTACC10.9708737864077669No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)