FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve848.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve848.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences234
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT6025.64102564102564No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT5724.358974358974358No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT218.974358974358974No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAATAAAAGCAAGGACTTT156.41025641025641No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC145.982905982905983No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT135.555555555555555No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT114.700854700854701No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC31.282051282051282No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT20.8547008547008548No Hit
AGCCTAGACATCCACTGCTGTCGTCGCAGCGTCAGATGTGGTAATGATCC20.8547008547008548No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGCCTTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT10.4273504273504274No Hit
CGCCTAGACATCCAGTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGGCCTCGTGGTAATGATCCTTCCGCTGTCTC10.4273504273504274No Hit
TGAGTAACCTCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.4273504273504274No Hit
AGTCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT10.4273504273504274No Hit
AGCCTAGACATCCACTGCGGAGAGGGTGTAGATAGCAAGAGCAAGGAGTG10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT10.4273504273504274No Hit
ACGCCATGTAATACGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTAATAATAATCCAATTTACCCAG10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAATCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAGAGCAAGGACTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAGGCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT10.4273504273504274No Hit
AGCCTAGACATCCACTGATGCCGACGACGTGGTAATGATCCTTCCGCTGT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAGAAGCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTCATCTAGTAAGAGCAAGGACTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGTAAGGACTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCAGCTGTCTCT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAATGTTGTTGTAAATAAAAGCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTGTCAATAAAAGCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACGTT10.4273504273504274No Hit
AGCCTAGACATCCAATGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTGTCAATAAAAGCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACGTCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGATGTTATCTAGTAAAAGCAAGGACTT10.4273504273504274No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACATCAACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.4273504273504274No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGAC10.4273504273504274No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT10.4273504273504274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.4273504273504274No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)