FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve845.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve845.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC31956.16197183098591No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC529.15492957746479No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT407.042253521126761No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC295.105633802816902No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT183.169014084507042No Hit
AGCCTAGACATCCACTGCTGCAGTGGTAATGATCCTTCCGCTGTCTCTTA152.640845070422535No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA50.8802816901408451No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGAATAAAAGCAGAGAC40.7042253521126761No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGGGAC30.528169014084507No Hit
AGCCTAGACATCCACTGCTGCCGACGGGTGGTAATGATCCTTCCGCTGTC20.35211267605633806No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGAATAAAAGCAGAGAC20.35211267605633806No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGAC20.35211267605633806No Hit
TGAGTACCCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.35211267605633806No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGAATAAAAGCAGAGAC20.35211267605633806No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTACTTTAGTTAAGAACATGAATT20.35211267605633806No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGAC20.35211267605633806No Hit
TGAGTAACCGCAACATCGTGAAAACACTGTTATCCATACTAGTTAGAGAA10.17605633802816903No Hit
TGAGTAACCGCAAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGA10.17605633802816903No Hit
AGCCTAGATATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTGATGATCCTTCCGCTGTCTC10.17605633802816903No Hit
AGCCTAGACACACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGACTT10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCGAGACAGCCACAGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCAACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACACTCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATTCACTGCTGAAAGTTGCTATCTAGTCAAAAGCAGAGACT10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTACGCTGTCTCT10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAACGCAGAGAC10.17605633802816903No Hit
AGCCTAGACTCCACTGCTGGAAGTTGTTATCTAGAATAAAAGCAGAGACT10.17605633802816903No Hit
CGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT10.17605633802816903No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACCTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGA10.17605633802816903No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCTACGAGTGGTAATGATCCTTCCGCTGTC10.17605633802816903No Hit
AGCCTAGAAATCCACTGCTGCAAGTTGTTATCTTGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGGAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGAAATCCACTGCTGCAGTGGTAATGATCCTTCCGCTGTCTCTTA10.17605633802816903No Hit
AGCCTAGACATCAACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT10.17605633802816903No Hit
TGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGGC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCATTCCGCTGTCTCT10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAAAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGCCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTTCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGTCATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGCAGAGAC10.17605633802816903No Hit
CGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGAATCAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAAAAGCATAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCAACTGCTGACGAGTGGTAATGATCCTTTCGCTGTCTCT10.17605633802816903No Hit
TGAGTAACCTCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCGACTGTGGTAATGATCCTTCCGCTGTCT10.17605633802816903No Hit
GAGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGA10.17605633802816903No Hit
TGAGTACCCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGGC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGAATAAAAACAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCGACGATTGGTAATGATCCTTCCGCTGTC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCGCTGTCT10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGATGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATACACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT10.17605633802816903No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
ACACCATGGAGACCACCCGAAACCTTGTAGCTGTTCTGGTTGAACTTGCC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATAATCCTTCCGCTGTCTCT10.17605633802816903No Hit
AGCCCAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAAAAGCAGAGCC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCATTCCGCTGTC10.17605633802816903No Hit
ACCATAGAAATCCCCCTCTGAAAGTTTTTATTTAAAAAAAAAACAAAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAAAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCAGAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGAACCTTCCGCTGTC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCGACGTTGGTAATGATCCTTCCGCTGTCT10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCAGTTGTAATGATCCTTCCGCTGTCTCTTA10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCGACGTGTGGTAATGATCCTTCCGCTGTC10.17605633802816903No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCC10.17605633802816903No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAAGAAAAGCAGAGAC10.17605633802816903No Hit
AGCCTAGATTCTTACTGGTGAACGGTGCTATCTAGAATAAAAGCAGAGAC10.17605633802816903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)