FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve841.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve841.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences233
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT7431.759656652360512No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC7030.042918454935624No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT177.296137339055794No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT125.150214592274678No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA62.575107296137339No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC41.7167381974248928No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT41.7167381974248928No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA41.7167381974248928No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGGGAC20.8583690987124464No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT20.8583690987124464No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAGAACTTT20.8583690987124464No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCATTCCGCTGTCTCT20.8583690987124464No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCCTCCGCTGTCTCTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTGACCGCAAAAACTTT10.4291845493562232No Hit
AGCCCAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTTATGGAAGTGAACGCAAAAACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGACAGTTTGTGGAAGTGAACGCAAAAACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAGAGCAGAGAC10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGATGTCTCT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGTCTCGTGTTAATGATCCTTCCGCTGTCTCT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.4291845493562232No Hit
AGCCTAGAAATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTC10.4291845493562232No Hit
AGCCTAGACATCCATTGCTGTCGTGGTCATGATCCTTCCGCTGTCTCTTA10.4291845493562232No Hit
AGCCTAGACATACACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT10.4291845493562232No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGGGTCGGAGATGTGGTAATGATCCTTCCGCT10.4291845493562232No Hit
AGCCTAGACATTCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTTTCTTA10.4291845493562232No Hit
ACCTAAACATCCTCTGCTGACGTGTGGTAATGATACTTCCGCTGTCCATT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTTCGTGGGCTCGGAGATGTGGTAATGATCCTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATACTTCCGCTGTATCT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCGCTGTCTCTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCCGTCTCT10.4291845493562232No Hit
AGCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTC10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTGAACGCAAAAACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTGAACGCAAAAACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAAGGCAAAAACTTT10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAGAAGCAGAGAC10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACC10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGGCTCGGAGATGTGGTAATGATC10.4291845493562232No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGAATAAAAGCAGAGAC10.4291845493562232No Hit
AGCCTAGACATCTACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.4291845493562232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)