FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve840.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve840.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2202
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC67630.699364214350588No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT43119.57311534968211No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTTTGGGTTAAAACCAAAGACTT31514.305177111716622No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT723.2697547683923704No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT612.7702089009990916No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT582.633969118982743No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC431.952770208900999No Hit
AGCCTAGACATCCACTGCTGGTGGGTGAGTGGTAATGATCCTTCCGCTGT241.08991825613079No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGCTCGAGATGTGGTAATGATCC241.08991825613079No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT231.0445049954586738No Hit
AGCCTAGACATCCACTGCTGACGACGAGTGGTAATGATCCTTCCGCTGTC190.862851952770209No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA170.7720254314259765No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT160.7266121707538601No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATTGATTAAACAGACGACTTT120.544959128065395No Hit
AGCCTAGACATCCACTGCTGGGTCTCTGGGCTCGGAGATGTGGTAATGAT90.4087193460490463No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGAC70.31789282470481384No Hit
AGCCTAGACATCCACTGCTGACGATGTGGTAATGATCCTTCCGCTGTCTC70.31789282470481384No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTTTGGGTTAAAACCAAAGACTT60.2724795640326975No Hit
AGCCTAGACATCCACTGCTGGGCTCGGAGATGTGGTAATGATCCTTCCGC60.2724795640326975No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGAATAAAAGCAGAGAC50.2270663033605813No Hit
AGCCTAGACATCCACTGCTGGTGTCGTGTCTCGTGGTAATGATCCTTCCG50.2270663033605813No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC40.18165304268846502No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGAATAAAAGCAGAGAC40.18165304268846502No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAGCGCAAAAACTTT40.18165304268846502No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTGAACGCAAAAACTTT40.18165304268846502No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT40.18165304268846502No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT40.18165304268846502No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT40.18165304268846502No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGCAGAGAC40.18165304268846502No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAGTAAAAGCAGAGAC40.18165304268846502No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGAATAAAAGCAGAGAC30.13623978201634876No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTCTGGGTTAAAACCAAAGACTT30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGCACTT30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTAT30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAATTGTTATCTAGAATAAAAGCAGAGAC30.13623978201634876No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAACTTT30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTCT30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAGAAGCAGAGAC30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGATAAAAGCAGAGACT30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACCTT30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTATTTTAATTACAACTCGTATTC30.13623978201634876No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGAATAAAAGCAGAGAC30.13623978201634876No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)