FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve826.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve826.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5292
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT251847.581254724111865No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC182134.41043083900227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT551.0393046107331823No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT430.8125472411186697No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT190.35903250188964475No Hit
AGCCTAGACATCCACTGCTGGCCGGGTGGTAATGATCCTTCCGCTGTCTC180.3401360544217687No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT170.3212396069538927No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT150.2834467120181406No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT130.24565381708238854No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGGCTT130.24565381708238854No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT110.20786092214663643No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGAC110.20786092214663643No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGCAGAGAC110.20786092214663643No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC100.1889644746787604No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT100.1889644746787604No Hit
AGCCTAGACATCCACTGCTGGGTGGTAATGATCCTTCCGCTGTCTCTTAT100.1889644746787604No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT100.1889644746787604No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT100.1889644746787604No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAGAGCAAGGACTT100.1889644746787604No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT90.17006802721088435No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT90.17006802721088435No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC90.17006802721088435No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGCCTT90.17006802721088435No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC90.17006802721088435No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC90.17006802721088435No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCCGGAGATGTGGTAATGATCC80.15117157974300832No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGGGAC80.15117157974300832No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATCTAGAATAAAAGCAGAGAC80.15117157974300832No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC80.15117157974300832No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGAATAAAAGCAGAGAC80.15117157974300832No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA80.15117157974300832No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA80.15117157974300832No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT70.13227513227513227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGCC70.13227513227513227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGCAGAGAC70.13227513227513227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAGAAGCAGAGAC70.13227513227513227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT70.13227513227513227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGGC70.13227513227513227No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT70.13227513227513227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT70.13227513227513227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCGGAGAC60.11337868480725624No Hit
GCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT60.11337868480725624No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT60.11337868480725624No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGACCAAGGACTT60.11337868480725624No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAGAGCAAGGACTT60.11337868480725624No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT60.11337868480725624No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGAATAAAAGCAGAGAC60.11337868480725624No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGCAGAGAC60.11337868480725624No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC60.11337868480725624No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)