FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve808.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve808.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1593
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT123177.27558066541117No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT734.58254865034526No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT221.3810420590081607No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTAAGGTTAAAACCAAAGACTTT150.9416195856873822No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAAAGCAAGGACTT140.8788449466415568No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT100.6277463904582549No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAATAAAAGCAAGGACTTT70.4394224733207784No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC70.4394224733207784No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT60.3766478342749529No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA60.3766478342749529No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAAAGCAAGGACTT50.31387319522912743No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTAAAAGCAAGGACTT50.31387319522912743No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.25109855618330196No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.25109855618330196No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.25109855618330196No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATCTAGTAAAAGCAAGGACTT40.25109855618330196No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT40.25109855618330196No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGCCTT30.18832391713747645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAAAGCAAGGACTT30.18832391713747645No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTT30.18832391713747645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCACGGACTT30.18832391713747645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACCT30.18832391713747645No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT30.18832391713747645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT30.18832391713747645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT30.18832391713747645No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAAAGCAAGGACTT30.18832391713747645No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.18832391713747645No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.18832391713747645No Hit
AGCCTAGACATCCACCGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGAAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAACGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCCGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGCCTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTACAAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT20.12554927809165098No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTT20.12554927809165098No Hit
AGCCTACACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGTAAAAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTATCTAGTAAAAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAAAGCAAGGACTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCGAGGACTT20.12554927809165098No Hit
AGCCTGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTT20.12554927809165098No Hit
AGCCTAGACTCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGTAAGGACTT20.12554927809165098No Hit
AGGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACT20.12554927809165098No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAAAGCAAGGACTT20.12554927809165098No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)