FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve804.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve804.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3606
Sequences flagged as poor quality0
Sequence length301
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT265673.65501941209097No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT2125.879090404880754No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT461.2756516916250693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT330.9151414309484194No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGCCTT330.9151414309484194No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT310.8596783139212423No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAGAGCAAGGACTT170.4714364947310039No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT140.3882418191902385No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT140.3882418191902385No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC130.36051026067665No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT130.36051026067665No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT120.33277870216306155No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT120.33277870216306155No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT120.33277870216306155No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT110.3050471436494731No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT110.3050471436494731No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGGCTT110.3050471436494731No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT100.27731558513588467No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATCTAGTAAGAGCAAGGACTT80.22185246810870773No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTCAGAGCAAGGACTT80.22185246810870773No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT80.22185246810870773No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT80.22185246810870773No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTAAGAGCAAGGACTT80.22185246810870773No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT70.19412090959511924No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTCGTAAGAGCAAGGACTT70.19412090959511924No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAGAGCAAGGACTT70.19412090959511924No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCGAGGACTT70.19412090959511924No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAGAGCAAGGACTT70.19412090959511924No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC60.16638935108153077No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTACGAGCAAGGACTT60.16638935108153077No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAGAGCAAGGACTT50.13865779256794233No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT50.13865779256794233No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGTAAGAGCAAGGACTT50.13865779256794233No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTATCTAGTAAGAGCAAGGACTT40.11092623405435387No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTATCTAGTAAGAGCAAGGACTT40.11092623405435387No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGACCAAGGACTT40.11092623405435387No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAGAGCAAGGACTT40.11092623405435387No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.11092623405435387No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGAATT40.11092623405435387No Hit
AGCCTGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT40.11092623405435387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)