FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve800.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve800.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2423
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT86835.82335947172926No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT79032.604209657449445No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT27511.349566652909617No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT341.4032191498142799No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT291.1968633924886503No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACTAAAGACTT140.5777961205117622No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC130.5365249690466364No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT120.4952538175815105No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT90.37144036318613294No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAGGCAAGAATT80.33016921172100705No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAAGACTT80.33016921172100705No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAGGAATT70.2888980602558811No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC50.20635575732562939No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAGAAGCAAGAATT50.20635575732562939No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT50.20635575732562939No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.20635575732562939No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATTTAATTAAAAGCAAGAATT50.20635575732562939No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT50.20635575732562939No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATTTAATTAAAAGCAAGAATT50.20635575732562939No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA50.20635575732562939No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATTTAATTAAAAGCAAGAATT50.20635575732562939No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.20635575732562939No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.16508460586050352No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.16508460586050352No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT40.16508460586050352No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTACAAGCAAGGACTT40.16508460586050352No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAACTAAAAGCAAGAATT40.16508460586050352No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATC40.16508460586050352No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATCTAGTAAAAGCAAGGACTT40.16508460586050352No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGAACTT40.16508460586050352No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAAAGCAAGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAGTTAAAAGCAAGAATT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTATAAGCAAGGACTT30.12381345439537762No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT30.12381345439537762No Hit
AGCCTAGACATCCACTGATGAAAGTTGCTATTTAATTAAAAGCAAGAATT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATTTAATTAAAAGCAAGAATT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAAAGCAAGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTGATTAAAAGCAAGAATT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAATTAAAAGCAAGAATT30.12381345439537762No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAAAGCAAGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTCGTAAAAGCAAGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCGAGGACTT30.12381345439537762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAAAGCAAGGACTT30.12381345439537762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)