FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve797.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve797.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1776
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC60133.840090090090094No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC28315.934684684684687No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT28115.822072072072071No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAGCTT23012.950450450450452No Hit
AGCCTAGACATCCACTGCTGCGAGTGTGGTAATGATCCTTCCGCTGTCTC422.364864864864865No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT412.3085585585585586No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC261.4639639639639639No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGTAGAGAC90.5067567567567568No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGAATAAAAGTAGAGAC60.33783783783783783No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA40.22522522522522523No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGGC40.22522522522522523No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGTAGAGAC40.22522522522522523No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAGAGCAAGGACTT40.22522522522522523No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGTC40.22522522522522523No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT30.16891891891891891No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGAATAAAAGTAGAGAC30.16891891891891891No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAGCCT30.16891891891891891No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC30.16891891891891891No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT30.16891891891891891No Hit
AGCCTAGACATCCACTGCTGGGCAGCGTCAGATGTGGTAATGATCCTTCC30.16891891891891891No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAA20.11261261261261261No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATTGATTAAAACCAAAAGCTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGAATAAAAGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGGGAC20.11261261261261261No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGAATAAAAGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAGAAGCTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCGGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAGTAAAAGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAACACCAAAAGCTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGGGCAGCGCCAGATGTGGTAATGATCCTTCC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATACAAGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATTGATTAAAACCAAAAGCTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGACCAAGGACTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAGAGCAAGGACTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAGAGCAAGGACTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTTTGGTAATGATCCTTCCGCTGTCTCTTATAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAGAAGTAGAGAC20.11261261261261261No Hit
AGCCTAGGCATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAGCTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAACGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGTAGAGAC20.11261261261261261No Hit
GAGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAGCT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAAGCTT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTATAAAAGTAGAGAC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGGC20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGCC20.11261261261261261No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGACT20.11261261261261261No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACAAAAAGCTT20.11261261261261261No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)