FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve782.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve782.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1870
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT120564.43850267379679No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT23112.352941176470589No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT693.689839572192513No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGCTAATAGCAGAGACT211.1229946524064172No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTTAAAAGCAGAGACT191.0160427807486632No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT170.9090909090909091No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT110.5882352941176471No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAGAGCAGAGACT100.53475935828877No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT100.53475935828877No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCGGAGACT80.42780748663101603No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTTAAAAGCAGAGACT80.42780748663101603No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTACAAGCAGAGACT60.32085561497326204No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC60.32085561497326204No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT60.32085561497326204No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAGGCAGAGACT60.32085561497326204No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT50.267379679144385No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT50.267379679144385No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACC50.267379679144385No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAGAAGCAGAGACT50.267379679144385No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGCCT50.267379679144385No Hit
AGCATAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT40.21390374331550802No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT40.21390374331550802No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTTAAAAGCAGAGACT40.21390374331550802No Hit
AGCCTAGACATCCACTGCTGGAGATGTGGTAATGATCCTTCCGCTGTCTC40.21390374331550802No Hit
AGCCTAGACATCCACTGCTAAAAGTTGCTATCTAGTTAAAAGCAGAGACT40.21390374331550802No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCCAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGCCTAGACATCCACTGCTGGCGTGGTAATGATCCTTCCGCTGTCTCTTA30.16042780748663102No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATCTAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTGGTTAAAAGCAGAGACT30.16042780748663102No Hit
CGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATCTAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAAACT30.16042780748663102No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGGGACT30.16042780748663102No Hit
AGCCTAGACATCCACTGATGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGGCT30.16042780748663102No Hit
AGCCTAGACATCCATTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.16042780748663102No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTCTAGTTAAAAGCAGAGACT20.10695187165775401No Hit
AGCCTAGAATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACTT20.10695187165775401No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGCTAAAAGCAGAGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTTACAAGCAGAGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAAGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAGAGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATATCTAGTTAAAAGCAGAGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGCGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATATAGTTAAAAGCAGAGACT20.10695187165775401No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10695187165775401No Hit
AGCCTAGACATCCAATGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTCAAAAGCAGAGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTTAAAAGCAAGGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGTTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.10695187165775401No Hit
AGCCTAGACATCCACTGCTGTAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10695187165775401No Hit
AGCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACTT20.10695187165775401No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10695187165775401No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)