FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve777.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve777.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44
Sequences flagged as poor quality0
Sequence length301
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT1125.0No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT511.363636363636363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT511.363636363636363No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT36.8181818181818175No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA36.8181818181818175No Hit
TGAGTACCCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA12.272727272727273No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTCTCTAGTTTAACGCAAGAACT12.272727272727273No Hit
TGAGTACCCGCAACATAGTGAAAACACCGTTATCCATACTAGTTAGAGAA12.272727272727273No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC12.272727272727273No Hit
AGCCTAGACACCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT12.272727272727273No Hit
ACACCATGTAATCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC12.272727272727273No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT12.272727272727273No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTTAGGATTAAAACCAAAGACTT12.272727272727273No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT12.272727272727273No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT12.272727272727273No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA12.272727272727273No Hit
AGCATAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAACCTTT12.272727272727273No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT12.272727272727273No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT12.272727272727273No Hit
ACACCGTGTAGACCACCCGACACCTTGTACGCATTGTCGTCCGACGTGTT12.272727272727273No Hit
TGAGTAACCGCACGATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA12.272727272727273No Hit
AGCCTACACATCCACTGCTGAAAGTTGTTATCTCGTTTAAAGCACGAACT12.272727272727273No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)