FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve770.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve770.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3416
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT136639.988290398126466No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT103030.152224824355972No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT1735.06440281030445No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT1715.005854800936768No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC852.4882903981264635No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAACTT471.375878220140515No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTT180.5269320843091335No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT120.351288056206089No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT120.351288056206089No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTTAGGATTAAAACCAGAGACTT120.351288056206089No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAGGACTT100.29274004683840754No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT80.234192037470726No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT80.234192037470726No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT80.234192037470726No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGGTTAAAACCAAAGACTT70.20491803278688525No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT60.1756440281030445No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT60.1756440281030445No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT60.1756440281030445No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTC60.1756440281030445No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAGCCAAAGACTT50.14637002341920377No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAGACTT50.14637002341920377No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT50.14637002341920377No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT50.14637002341920377No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAGAGACTT50.14637002341920377No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT50.14637002341920377No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAGAGCAAGGACTT50.14637002341920377No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACTGATTAAAACCAAAGACTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT40.117096018735363No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATTGATTAAAACCAAAGACTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTGATTAAAACCAAAGACTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGGCTT40.117096018735363No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT40.117096018735363No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCACAGACTT40.117096018735363No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC40.117096018735363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGGCTT40.117096018735363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAGACCAAAGACTT40.117096018735363No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)