FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OODve767.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OODve767.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3870
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT208853.95348837209303No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT99725.762273901808786No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT751.937984496124031No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA631.627906976744186No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATATCTAGTAAAAGCAAGGACTT491.2661498708010337No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC451.1627906976744187No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAAGACTT411.0594315245478036No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA380.9819121447028423No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACCT150.3875968992248062No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTCTAGTAAAAGCAAGGACTT120.31007751937984496No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGGCTT110.2842377260981912No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT100.2583979328165375No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACCT100.2583979328165375No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT100.2583979328165375No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTAAAAGCAAGGACTT90.23255813953488372No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAGCCAAAGACTT80.20671834625322996No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT70.1808785529715762No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTAAAAGCAAGGACTT70.1808785529715762No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTAAAAGCAAGGACTT60.15503875968992248No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT60.15503875968992248No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTGGTAAAAGCAAGGACTT60.15503875968992248No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTACAAGCAAGGACTT60.15503875968992248No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATTGATTAAAACCAAAGACTT60.15503875968992248No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTC60.15503875968992248No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.12919896640826875No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAGGCAAGGACTT50.12919896640826875No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCCATCTAGTAAAAGCAAGGACTT50.12919896640826875No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT50.12919896640826875No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAGAAGCAAGGACTT50.12919896640826875No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAACGACTT50.12919896640826875No Hit
AGCCTAGACATCCACTGCCGAAAGTTGCTATCTAGTAAAAGCAAGGACTT50.12919896640826875No Hit
AGCCTAGACATCCACTGATGAAAGTTGCTATCTAGTAAAAGCAAGGACTT40.10335917312661498No Hit
AGCCTAGATATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT40.10335917312661498No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT40.10335917312661498No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT40.10335917312661498No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTAAAAGCAAGGACTT40.10335917312661498No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)