FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi759.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi759.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1890
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT68136.03174603174603No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT43923.227513227513228No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC301.5873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT291.5343915343915344No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGCCTTT221.164021164021164No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATACAAGCAAGGACTTT201.0582010582010581No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTGTAAATAAAAGCAAGGACTTT180.9523809523809524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTACATAAAAGCAAGGACTTT150.7936507936507936No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATCAAAGCAAGGACTTT130.6878306878306878No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAACTAAAAGCAAGGACTTT130.6878306878306878No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTGTAAATAAAAGCAAGGACTTT120.6349206349206349No Hit
AGCCTAGACATCCACTGCTGACAGTTTGTGGAAGTGAACGCAAAAACTTT120.6349206349206349No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT110.582010582010582No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAACCTTT110.582010582010582No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAACGCAAGGACTTT100.5291005291005291No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAACAACTTT80.4232804232804233No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTGTAAATAAAAGCAAGGACTTT80.4232804232804233No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAATAAAAGCAAGGACTTT80.4232804232804233No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCACAAACTTT80.4232804232804233No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT70.3703703703703704No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT70.3703703703703704No Hit
AGCCTAGACATCCACTGCTGAACGTTTGTGGAAGTGAACGCAAAAACTTT60.31746031746031744No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACCTT60.31746031746031744No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT60.31746031746031744No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAGAGCAAGGACTTT60.31746031746031744No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT60.31746031746031744No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTGAACGCAAAAACTTT60.31746031746031744No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAGCGCAAAAACTTT50.26455026455026454No Hit
AGCCTACACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT50.26455026455026454No Hit
AGCCTAGACATCCACTGCTGCAAGTTTGTGGAAGTGAACGCAAAAACTTT50.26455026455026454No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAACAGCAAGGACTTT50.26455026455026454No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAAGCAAGGACTTT50.26455026455026454No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACGTT40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACGTT40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAGATAAAAGCAAGGACTTT40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAACTTT40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACCTT40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAGGCAAGGACTTT40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGCAGTGAACGCAAAAACTTT40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTC40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAACACTTT40.21164021164021166No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT40.21164021164021166No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTGTAAATAAAAGCAAGGACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTGTAAATCAAAGCAAGGACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAAATTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCGAACGCAAAAACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGCC30.15873015873015872No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTGAACGCAAAAACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGATGAAAGTTTGTGGAAGTGAACGCAAAAACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTGTAAATACAAGCAAGGACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTAAATAAAAGCAAGGACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGGGACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAGAAACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGCACGCAAAAACTTT30.15873015873015872No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTACAGCAAGAACT20.10582010582010583No Hit
AGCCTGGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.10582010582010583No Hit
AGCCTAAACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGAATTT20.10582010582010583No Hit
AACCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAACAGCAAGGCCTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCCAAAACTTT20.10582010582010583No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGACCGCAACAACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTGTAAATCAAAGCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGAATAAAAGCAGAGAC20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTGAATAAAAGCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAATGCAAAAACTTT20.10582010582010583No Hit
AGCCTAGACATCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTC20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCCAGGACTTT20.10582010582010583No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTGAACGCAAAAACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAATCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAGAACTTT20.10582010582010583No Hit
AGCCTAGACATTCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGCACT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTGAACGCAAAAACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATACAAGCAAGGCCTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGAAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAGAAGCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAATGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTGAACGCAAAAACTTT20.10582010582010583No Hit
AGCATAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT20.10582010582010583No Hit
AGCCTAGAAATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGGCTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAACCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAATAACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACATT20.10582010582010583No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTGAACGCAAAAACTTT20.10582010582010583No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTGTAAATAAAAGCAAGGACTTT20.10582010582010583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)