FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi756.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi756.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94
Sequences flagged as poor quality0
Sequence length301
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT4750.0No Hit
AGCCTAGACATCCACTGCTGGTGTATAAGAGACAGTGGTAATGATCCTTC55.319148936170213No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA55.319148936170213No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC33.1914893617021276No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA33.1914893617021276No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT22.127659574468085No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGACGACGTGGTAATGATCCTTCCGCTGTCTC11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT11.0638297872340425No Hit
ACTCCATGAAGGCCACCGGACACCTTGTACGCACTGTCGTCCGACGTGTT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTTTCT11.0638297872340425No Hit
TGAGTAACCGCAATATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT11.0638297872340425No Hit
GGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT11.0638297872340425No Hit
AGCCTAGACATCCACTGATGTCTCGTGGTAATGATCCTTCCGCTGTCTCT11.0638297872340425No Hit
TGAGTAACCGCAACATAGTGAACGGCTATTCGACGCTGACTCATCCTGTC11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCCCTTATA11.0638297872340425No Hit
AGCTAGACATCCACTGCTGGCTCGGAGATGTGGTAATGATCCTTCCGCTG11.0638297872340425No Hit
ACACCGTGTAGACCGCCAGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGTCTCT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATGCTTCCGCTGTCT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGGCTCGTGGTAATGATCCTTTCGCTGTTTCT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACATTCGCTGTCACG11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGGAATGATCCTTCCGCTGTCT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTCACGTGGGCTCGGAGATGTGGTAATGATC11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGCCTCT11.0638297872340425No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGCCGACTAGTGGTAATGATCTTTCCGCTGTC11.0638297872340425No Hit
AGCCTAGACATCCACTGGAGGCTCGTGGTAATGATCCTTCCGCTGTCTCT11.0638297872340425No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGGCTCGGAGATGTGGTAATGATCCTTCCGCT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT11.0638297872340425No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGTAATGATCCTTCCGCTGTC11.0638297872340425No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)