FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi753.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi753.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68
Sequences flagged as poor quality0
Sequence length301
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT1217.647058823529413No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT1116.176470588235293No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC811.76470588235294No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTT710.294117647058822No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT45.88235294117647No Hit
AGCCTAGACATCCACTGCTGTAGCAATAAGTGGTAATGATCCTTCCGCTG34.411764705882353No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA34.411764705882353No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC22.941176470588235No Hit
TGAGTACCCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA22.941176470588235No Hit
AGCCTAGACATCCACTGCTGTGGCAATAAGTGGTAATGATCCTTCCGCTG22.941176470588235No Hit
ACCCCGTGTAGTCCTCCCGAGGTCTGGTAGGCCTTGCCGGAGAACTTGCC11.4705882352941175No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTTTCT11.4705882352941175No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACG11.4705882352941175No Hit
ACGCCGTGAAGACCACCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC11.4705882352941175No Hit
AGCCTAGACATCCATTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT11.4705882352941175No Hit
TGAGTAACCGCAACATAGTGAACGGCTATTCGACGCTGACTCATCCTGTC11.4705882352941175No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCGCTGTCTCTT11.4705882352941175No Hit
AGCCTAGACATCCACGCTGTCTCGTGGTAATGATCTTTCCGCTGTCTCTT11.4705882352941175No Hit
AGCCTAGACATCCATTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT11.4705882352941175No Hit
TGAGTAACCGCAACATAGTGAAAACACCGTTATCCATACTAGTTAGAGAA11.4705882352941175No Hit
AGCCTAGACATCCCTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTTT11.4705882352941175No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGCATAAATGCAGAGAC11.4705882352941175No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTTTCTCT11.4705882352941175No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTAT11.4705882352941175No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)