FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi752.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi752.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences541
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC15328.280961182994456No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT11020.33271719038817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTGAAAGCAGAGACT8716.081330868761555No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT6211.460258780036968No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAAGACT325.914972273567468No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAATAAAAGCAAGGACTTT91.6635859519408502No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGAACT71.2939001848428837No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA71.2939001848428837No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT50.9242144177449169No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT40.7393715341959335No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAAGACT40.7393715341959335No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.36968576709796674No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC20.36968576709796674No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATCTAGTTAAAAGCAGAGACT20.36968576709796674No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTTAAAAGCAGAGACT20.36968576709796674No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAAGAAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTGAAAGCAAGAACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTCTAGTTAAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.18484288354898337No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGTAAAGACT10.18484288354898337No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGATATCTAGTTGAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGA10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTACAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTTAAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCCAGTTGAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTATCTAGAATAGAAGCAGAGAC10.18484288354898337No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTCGAAAGCAGAGACT10.18484288354898337No Hit
CCTAGACATCCACTGCTGAGAGTTGCCATCTAGTTAAAAGCAGAGACTTT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTATCTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTGAAAGCAAGAACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTGTAAATAAAAGCAAGGACTTT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAATTAAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTTAAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.18484288354898337No Hit
AGCCTAGACGTCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGAACT10.18484288354898337No Hit
AGCCTAGACTCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACTT10.18484288354898337No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGTC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCGGAGACT10.18484288354898337No Hit
AGCCTAGATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAAGACTTT10.18484288354898337No Hit
AGCCTAGAAATCCACTGATGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTGTCAATAAAAGCAAGGACTTT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTTGAAAGCAGAGACT10.18484288354898337No Hit
AGGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAGAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCCATCTAGTTAAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTTGAAAGCAGAGACT10.18484288354898337No Hit
ACTCTCCAATCTTCATCACTTCCATCTCACAAATCTAAAATAGTTTACTT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAGGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTCGACTACAAGCAGCGCC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTCCTATCTAGTTAAAAGCAGAGACTT10.18484288354898337No Hit
AGCCTAGACATCCAGTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT10.18484288354898337No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTCGAAAATCAAAGCAAGGAGTGG10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTAACTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATCTAGTTGAAAGCAGAGACT10.18484288354898337No Hit
AGCCAGACATCCACTGCTGAAAGTTGCTATCTAGTTGAAAGCAGAGACTT10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGAATAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAAGAAAAGCAGAGAC10.18484288354898337No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.18484288354898337No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)