FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi751.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi751.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4680
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT163835.0No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT126326.987179487179485No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC61713.183760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT2575.4914529914529915No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT911.9444444444444444No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT621.3247863247863247No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC250.5341880341880342No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC250.5341880341880342No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT150.3205128205128205No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAGGGACTT140.2991452991452992No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT120.2564102564102564No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC120.2564102564102564No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT110.23504273504273504No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT100.2136752136752137No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACCT100.2136752136752137No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT90.19230769230769232No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGAGACTT80.17094017094017094No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTGGTAAAAGCAGGGACTT80.17094017094017094No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTC80.17094017094017094No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT70.1495726495726496No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT70.1495726495726496No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAGAGCAAGGACT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTTAAAAGCAGAGACT60.1282051282051282No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT60.1282051282051282No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATCTAGTAAAAGCAGGGACTT60.1282051282051282No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTAAAAGCAGGGACTT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATATAGTAAAAGCAGGGACTT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGGCT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAATGCAGGGACTT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATCTAGTAAAAGCAGGGACTT60.1282051282051282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTAAAAGCAGGGACTT50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAGGCAGGGACTT50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACC50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAGTAAAAGTAGAGAC50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGTAGAGAC50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTTAAAAGCAAGGACT50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAGAGTAGAGAC50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTAAAAGCAGGGACTT50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTCAAAAGCAAGGACT50.10683760683760685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGCCTT50.10683760683760685No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)