FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi749.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi749.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT11222.810590631364562No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT9619.551934826883908No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC377.535641547861507No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC244.887983706720977No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT204.0733197556008145No Hit
AGCCTAGACATCCACTGCTGAGATGTGGTAATGATCCTTCCGCTGTCTCT193.8696537678207736No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTGAAAGCAGAGACT142.8513238289205702No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT142.8513238289205702No Hit
AGCCTAGACATCCACTGCTGGGTCTCGTGGTAATGATCCTTCCGCTGTCT132.6476578411405294No Hit
AGCCTAGACATCCACTGCTGGGAGATGTGGTAATGATCCTTCCGCTGTCT122.4439918533604885No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC91.8329938900203666No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT91.8329938900203666No Hit
AGCCTAGACATCCACTGCTGCGGAGATGTGGTAATGATCCTTCCGCTGTC91.8329938900203666No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT81.6293279022403258No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT40.8146639511201629No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC30.6109979633401221No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAAATTT30.6109979633401221No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATC30.6109979633401221No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA30.6109979633401221No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAAGGAC20.40733197556008144No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAGAGCAAGAATT20.40733197556008144No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT20.40733197556008144No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT20.40733197556008144No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAGAAGCAAGGACT20.40733197556008144No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAA20.40733197556008144No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCAGCTGTC20.40733197556008144No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATTTAATTAAAAGCAAGAATT20.40733197556008144No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTATTATAC10.20366598778004072No Hit
TGCCTAGACATCCACTGCTTCGGATTTTTGGTTATTATCCTTCCGCTGTT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGACAGTTGCTAGTTAATTAAAAGTCAGAAGG10.20366598778004072No Hit
AGCCTAGACATCTACTGATGCGGAGATGTGGTAATGATCCTTCCGCTGGC10.20366598778004072No Hit
AACCTAGACATCAACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.20366598778004072No Hit
AGCCTAGACATTCACTGCTGGGAGGTGTGGTAATGATCCTTCCGCTGTCT10.20366598778004072No Hit
AGCCTACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATACAC10.20366598778004072No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGCCGACAAGTGGTAATGATCCTTCCGCTGTC10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGGATT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAACTAAAAGCAAGAATT10.20366598778004072No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT10.20366598778004072No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGTGTGTATAAGAGACAGTGGTAATGATCCTT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATGAAAAGCAAGAATT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTGAAAGCAGAGGCT10.20366598778004072No Hit
CCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATTTT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATTTAATTAAAAGCAAGAATT10.20366598778004072No Hit
AGTCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.20366598778004072No Hit
AGCCTCTACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTACGCTGTCTCTTATAC10.20366598778004072No Hit
CGCCTAGACATCCACTGCTTTGGTAATGATCCTTCCGCTGTCTTTTATAC10.20366598778004072No Hit
AGCCAAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATATTTAATTAAAAGCAAGAATT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTATCTAGTTAAAAGCAAGGACTT10.20366598778004072No Hit
AGTCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGGGAGGTGTGGTAATGATCCTTCGGCTGTCT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTTAAAAGCAAGGACT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTTCGCTGTCTCT10.20366598778004072No Hit
AGCCTAGAGATACACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGGGCCTCGTGGTAATGATCCTTCCGCTGTCT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTCCTTCCGCTGT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTTCGCTGTC10.20366598778004072No Hit
TGAGTAACCGCACCATAGTGAACGGCTATTCGACGCTGACTCATCCTGTC10.20366598778004072No Hit
AGCCTACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATTTT10.20366598778004072No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT10.20366598778004072No Hit
CGCCTAGACTTCCTCTGCTGTAAGTTGTTATCTAGTTAAATTCAAGTACT10.20366598778004072No Hit
AGCCTAGACATCCACGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACTT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAATTAAAAGCAAGAATT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGCCGTCGAGTGGTAATGATCCTTCCGCTGTC10.20366598778004072No Hit
CGCCTAGACATCCACTGCTTAAAGTTGCTATTTAATTAAAAGCAAGAATT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGCGGAGGTGTGGTAATGATCCTTCCGCTGTC10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAACT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAT10.20366598778004072No Hit
AGCCTAGACCATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAAT10.20366598778004072No Hit
AGCCTAGAACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGT10.20366598778004072No Hit
AGCCTAAACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT10.20366598778004072No Hit
AGCATAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.20366598778004072No Hit
TGAGTAACCGCAACATAGTGAACGGCTATTCGTCGCTGACTCATCCTGTC10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTTGATGTGGTAATGATCCTTCCGCTGTCTCTT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTGAAAGCAGGGACT10.20366598778004072No Hit
AGCCTAGACAGCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGGGAGATGTGCTAATGATCCTTCCGCTGTCT10.20366598778004072No Hit
AGCCTAGACATACACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.20366598778004072No Hit
AGCCTAGACATCCACTCCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.20366598778004072No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.20366598778004072No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)