FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi748.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi748.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences364
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC23564.56043956043956No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT256.868131868131869No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC154.1208791208791204No Hit
AGCCTAGACATCCACTGCTGCCGTGGTAATGATCCTTCCGCTGTCTCTTA123.296703296703297No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT102.7472527472527473No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC61.6483516483516485No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGTAGAGAC30.8241758241758242No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.8241758241758242No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGTAGAGAC20.5494505494505495No Hit
AGCCTAGACATCCACTGCTGCCACGGTGGTAATGATCCTTCCGCTGTCTC20.5494505494505495No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGGC20.5494505494505495No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT20.5494505494505495No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.5494505494505495No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTGGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGCCGTGGTATGATCCTTCCGCTGTCTCTTAT10.27472527472527475No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAA10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT10.27472527472527475No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACAGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.27472527472527475No Hit
AGCCTAGACATCCACTGATGACAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCCTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGACT10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAGAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGCCGTGGTAATGATCCTTCCGCTGCCTCTTA10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGGTCTAGTGGTAATGATCCTTCCGCTGTCTC10.27472527472527475No Hit
CGGCTGCGTTCTTCACCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATCAAAGTAGAGAC10.27472527472527475No Hit
ATCCTCTACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCCGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
TGACTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATACAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGGGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCAC10.27472527472527475No Hit
AGCCTAGACATCCAACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGA10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGCGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAAAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGCTGTGGTAATGATCCTTCCGCTGTCTCTTA10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATACACGTAGTGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATAGAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGACT10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATATAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGGTCTCTTGGTAATGATCCTTCCGCTGTCTC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
AGCCTAGACATCCGCTGCTGCCGTGGTAATGATCCTTCCGCTGTCTCTTA10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAACAGCAAGGACTT10.27472527472527475No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.27472527472527475No Hit
GCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACTT10.27472527472527475No Hit
AGCCTAGACATCCACCGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.27472527472527475No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)