FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi740.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi740.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences321
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC23974.45482866043614No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT257.78816199376947No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT30.9345794392523363No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA30.9345794392523363No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT20.6230529595015576No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC20.6230529595015576No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.6230529595015576No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGTAGAGAC20.6230529595015576No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC20.6230529595015576No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGAATAAAAGTAGAGAC20.6230529595015576No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGAATAAAAGTAGAGAC20.6230529595015576No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGACGACGTGGTAATGATCCTTCCGCTGTCTC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGGGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGGC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAAAC10.3115264797507788No Hit
ACACCGTGCAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGCGTT10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAGAGACT10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAAAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATAATCCTTCCGCTGTC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGACTAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCAAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAA10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAGAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTAACTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGGTAATGATCCTTCCGCTGTCTCTTATACAC10.3115264797507788No Hit
TGAGTAACCGCACCATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTTTCTCT10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATCAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGAATCCACTGCTGAAAGTCGTTATCTAGAATAAAAGTAGAGACT10.3115264797507788No Hit
ACTCCATGGAGGCCACCAGATACCTTGTACGCGTTGTCGTCCGACGTGTT10.3115264797507788No Hit
TGAGTATCCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.3115264797507788No Hit
AGCCTAGACATCCACTGCTTCCGACGAGTGGTAATGATCCTTCCGCTGTC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCTGTCTC10.3115264797507788No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
GACTCGCCATCCCCTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGACT10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTGTTAAAAGCAGAGACTT10.3115264797507788No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGATGTTATCTAGAATAAAAGTAGAGAC10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.3115264797507788No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGGATAAAAGTAGAGAC10.3115264797507788No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)