FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi735.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi735.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3403
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT233368.55715545107259No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT2637.728474875110197No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATTGATTAAAACCAAAGACTT441.2929767851895386No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA371.087275933000294No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTAAGGTTAAAACCAAAGACTTT351.0285042609462238No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT320.940346752865119No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAGAACCAAAGACTT280.8228034087569792No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGGCTT260.7640317367029091No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAGACTT230.6758742286218044No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAGGACTT180.5289450484866294No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAACGACTT180.5289450484866294No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT160.4701733764325595No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATTGATTAAAACCAAAGACTT130.38201586835145457No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCCAAGACTT130.38201586835145457No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTC130.38201586835145457No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT110.32324419629738466No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAGCCAAAGACTT100.29385836027034967No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCGATTAAAACCAAAGACTT100.29385836027034967No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT100.29385836027034967No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATTGATTAAAACCAAAGACTT90.2644725242433147No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT80.23508668821627976No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCGAAGACTT80.23508668821627976No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATTGATTAAAACCAAAGACTT70.2057008521892448No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAGAGACTT70.2057008521892448No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGGTTAAAACCAAAGACTT70.2057008521892448No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACCT70.2057008521892448No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT70.2057008521892448No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTTGATTAAAACCAAAGACTT60.17631501616220982No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGCCTT60.17631501616220982No Hit
AGCCTAAACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT60.17631501616220982No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATCAAAACCAAAGACTT50.14692918013517484No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATTGATTAAAACCAAAGACTT50.14692918013517484No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACTAAAGACTT50.14692918013517484No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTGATTAAAACCAAAGACTT50.14692918013517484No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATTGATTAAAACCAAAGACTT50.14692918013517484No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATTGATTAAAACCAAAGACTT50.14692918013517484No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTAAGGCTAAAACCAAAGACTTT50.14692918013517484No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATTGATTAAAACCAAAGACTT50.14692918013517484No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAACACCAAAGACTT40.11754334410813988No Hit
AGCTCGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTTT40.11754334410813988No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACAT40.11754334410813988No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACAAAAGACTT40.11754334410813988No Hit
AGCCAAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT40.11754334410813988No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCACAGACTT40.11754334410813988No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATATTGATTAAAACCAAAGACTT40.11754334410813988No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAGAGCAAGAACT40.11754334410813988No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)