FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi732.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi732.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1497
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT90660.52104208416834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT20513.694054776219106No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTT17611.75684702738811No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT80.5344021376085505No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAGACTT80.5344021376085505No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTTAAAAGCAGAGACT70.46760187040748163No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATCTAGTTAAAAGCAGAGACT60.4008016032064128No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT50.33400133600534404No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACC50.33400133600534404No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGGCT40.26720106880427524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC30.2004008016032064No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTACAAGCAGAGACT30.2004008016032064No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.2004008016032064No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAGAAACTT30.2004008016032064No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAGAGCAGAGACT30.2004008016032064No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGCTAAAAGCAGAGACT30.2004008016032064No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGCGACT30.2004008016032064No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.2004008016032064No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAGAAGCAGAGACT30.2004008016032064No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAGGCAGAGACT30.2004008016032064No Hit
AGCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACTT30.2004008016032064No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTTGTTAAAAGCAGAGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTTAAAAGCAGAGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTTAAAAGCAGAGACT20.13360053440213762No Hit
AGCCTAGACAATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACCT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAGAGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATGGATTAAAACCAAAAACTT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCGGAGACT20.13360053440213762No Hit
AGCCTAGACATCTACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.13360053440213762No Hit
ATCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTGGTTAAAAGCAGAGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAGAGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACC20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAAACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGGGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTCAAAAGCAGAGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAACAGAGACT20.13360053440213762No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCCATCTAGTTAAAAGCAGAGACT20.13360053440213762No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)