FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi724.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi724.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences625
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT38361.28No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC7011.200000000000001No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT406.4No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT254.0No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGAGACTT40.64No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCAAGTTCAAAGCAAGAACT30.48No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTTCAAAGCAAGAACT30.48No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT30.48No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAGAGCAAGAACT30.48No Hit
AGCATAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC30.48No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAGGAACT20.32No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC20.32No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC20.32No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT20.32No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCAGCTGTCTCTTATAC20.32No Hit
AGCCTAGAAATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT20.32No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGGACT20.32No Hit
AGCCTAGACATTCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT20.32No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT20.32No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTTCAAAGCAAGAACT20.32No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAA20.32No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.32No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.32No Hit
AGCCTAGACATCCACTGCTGTAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCGGCTGTCTCTT10.16No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTTCGCTTTCTCTTATAA10.16No Hit
CCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACTTT10.16No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCTGCTGTCTCTTATAC10.16No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCATAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAGGCAAGAACT10.16No Hit
AGCCTAGACATCCCCTGCTGTCTGTGGTCATGATCCTTCCGCTGTCACTT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCCAGTTCAAAGCAAGAACC10.16No Hit
TGAGTAACCGCACCATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCCAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATTTAATTAAAAGCAAGAATT10.16No Hit
CGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACG10.16No Hit
AGCCTAGACATCCACTGCTCTGTGGTAATGATCCTTCCGCTGTCTCTTAT10.16No Hit
AGCCTAGACATCCACTGATGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.16No Hit
AGCCTAGACATCAACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.16No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCCCTTATAC10.16No Hit
ATCCTCTACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCTACTGCTGTCTGTGGTAATGATCCTTATGCTGTCACTT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAAAAGCAGAGAC10.16No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGATAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTGGTTCAAAGCAAGAACT10.16No Hit
AGCCAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATACA10.16No Hit
ACGCCGTGGAGGCCTCCGGAGACGCCGTAGCTCTTGCCGTCGAACTTGCC10.16No Hit
AGCCTAGACATCCACTACTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTTCAAAGCAGGAACT10.16No Hit
AGCCTAGACATCCACTGCTGCAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
ATCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGCCGACGGGGGTAATGATCCTTCCGCTGTCT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGGTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAATT10.16No Hit
ACCTCGCCATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACTT10.16No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCGAAGCAAGAACT10.16No Hit
AGCCTAGAAATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.16No Hit
ACGCCATGGAAGCCACCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.16No Hit
AGCCTAGATATCCACTGCTGACAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCTAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCTTTCCGCTGTCTCTT10.16No Hit
AGCCTAGACAGCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
TGAGTAACCTCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.16No Hit
GCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACTT10.16No Hit
AGCCTAGACATCCACTGCTTTGGTAATGATCCTTCCGCTGTCTCTTATAC10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTAAATTAAAAGCAAGAATT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTCCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCATTCCGCTGTCTCTT10.16No Hit
AGCCTAGACATCCCTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACTT10.16No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATACTTAAGCTGTATCTTATAA10.16No Hit
AGCCTAGACATCCACTGCTGTGGTAATATCCTTCCGCTGTCTCTTATACA10.16No Hit
AGTCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACA10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.16No Hit
AGTCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTTAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCAATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTCAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCGAAGCAAGAACT10.16No Hit
TGAGTAACCTCAACATAGTGAAAACACCGTTATCCATACTAGTTAGAGAA10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATAAATAGTGCAAAGAAAGAACA10.16No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAACGCAAGAATT10.16No Hit

[FAIL]Adapter Content

Adapter graph