FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi717.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi717.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences828
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT21826.32850241545894No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC12815.458937198067632No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT12515.096618357487923No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT759.057971014492754No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC688.212560386473431No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGCTCGGAGATGTGGTAATGATC303.6231884057971016No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC212.536231884057971No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT182.1739130434782608No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT172.0531400966183577No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT70.8454106280193237No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATTTAATTAAAAGCAAGAATT40.4830917874396135No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA30.36231884057971014No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTGTAAATAAAAGCAAGGACTTT20.24154589371980675No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGACCT20.24154589371980675No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGAC20.24154589371980675No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCTCTGTCTC20.24154589371980675No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT20.24154589371980675No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGAACTT20.24154589371980675No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT20.24154589371980675No Hit
AGCCTAGACATCCACTGCTGGCCTCGGGGTAATGATCCTTCCGCTGTCTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGCATT10.12077294685990338No Hit
GAGCTTAGACATCACTTGCTGAAGGTTGTGGTAAATAAAGCAAAGGCCTT10.12077294685990338No Hit
AGCCTAGACATCCACTTCTGGTATCGTGGCTCGGAGATGTGGTAATGATC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTATGATCCTTCCGCTGTCTCTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGAATAAAAGCAGAGAC10.12077294685990338No Hit
AGGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTG10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAGGCAAGGACTTT10.12077294685990338No Hit
TCACTTGCGCACGAACCGCTGTCTCTTATACACATCTGACGCTGCCGACG10.12077294685990338No Hit
AGCCTAGACATCCACCGCTGCCGAAGAGTGGTAATTATCCTTCCGCTGTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGAATAAAAGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTATCTAGAATAAAAGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACGGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCATAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGACTT10.12077294685990338No Hit
GCCTAGACATCCACTGCTGGTCTCGTGGCTCGGAGATGTGGTAATGATCC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGATGTCTC10.12077294685990338No Hit
GCCTCGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATTT10.12077294685990338No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTTGTGGCTCGGAGATGTGGTAATGATC10.12077294685990338No Hit
AGCCTAGACATACACTGCTGGTCTCGTGGCTCGGAGATGTGGTAATGATC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGCGGACGAGTGGTAATGATCCTTCCGCTGTC10.12077294685990338No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATACAAGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGTTAAAAGCAAGAACT10.12077294685990338No Hit
AGCCTAGACATACACTGCTGGTCTCGTTGTAATGATCCTTCCGCTGTCTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTGTAAATAAAAGCAAGGACTTT10.12077294685990338No Hit
TGCCTAGACTTCCACTGCTTAAAGTTGCTATTCATTTAAATGCAAGAATT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCTTGGTAATGATCCTTCCGCTGTCTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATACAAGCAAGGACTTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTGGTTATCTAGAATAAAAGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTTGTGGTAATGATCCTTCCGCTGTCTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATGAAAGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCAACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.12077294685990338No Hit
AGCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGGCTCGTGGTAATGATCCTTCCGCTGTCTC10.12077294685990338No Hit
AGCCTAGCATCCACTGCTGGTCTCGTGGCTCGGAGATGTGGTAATGATCC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGCTCGGTGATGTGGTAATGATC10.12077294685990338No Hit
AGCCTAGACCATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTTAAAGCAAGAATT10.12077294685990338No Hit
AGCCAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATTT10.12077294685990338No Hit
AAGCCTAGACATCCACTGCTGGTCTCGTGGCTCGGAGATGTGGTAATGAT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATATCCTTCCGCTGTCT10.12077294685990338No Hit
AAACTAGACATCCACTGCTTACAGTGTTTATCTAGAGTAACCGCAGAGCC10.12077294685990338No Hit
AGCCTAGACATTCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATAATCCTTCCGCTGTCTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGGATT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGTTGTCTC10.12077294685990338No Hit
AGCCACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGACTTTTC10.12077294685990338No Hit
AGCCTAGCATCCCCTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATTT10.12077294685990338No Hit
AGCTAGCCATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGTC10.12077294685990338No Hit
AGCCTAGACATCCACTGATGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.12077294685990338No Hit
AGCTAGCCATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATTT10.12077294685990338No Hit
AGCCTAGACATCCACTCTGAAAGTTGTTATCTAGAATAAAAGCAGAGACT10.12077294685990338No Hit
AGCCTAGACATCTACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTGTC10.12077294685990338No Hit
ATCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.12077294685990338No Hit
GCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGACT10.12077294685990338No Hit
AGCCTACACATCCACTGCTGGTCTCGTGGTAATTATCCTTCCGCTGGCTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGAATAAAAGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATTTAATTAAAAGCAAGAATT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTACAAGCAAGAATT10.12077294685990338No Hit
AGCCTAGACATCCATTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCGGTCTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATACTTCCGCTGTC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGACTCGGAGATGTGGTAATGATC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCCATTTAATTAAAAGCAAGAATT10.12077294685990338No Hit
GGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.12077294685990338No Hit
AAGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGAACT10.12077294685990338No Hit
AGCCTAGACACTTCATGCTGAAAGTTGCCATTTAATCCAAAGCAAGAATT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAATTAAAAGCAAGAATT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTATCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGAATAAAAGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGAGACTTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGATAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTATCTAGGATAAAAGCAGAAACT10.12077294685990338No Hit
AGCCTAGACATCCATGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGACT10.12077294685990338No Hit
AGCCTAGGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAAT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTCAAAGCACGAACT10.12077294685990338No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTACTTAAAAGCAAGAATT10.12077294685990338No Hit
GCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGCACGGAGATGTGGTAATGATC10.12077294685990338No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.12077294685990338No Hit
GGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.12077294685990338No Hit
AATCTTCACTCTCACTCTTCTCCCTCTTTGCACTCTTAATCTACTCCCCT10.12077294685990338No Hit
AGACTAGACATCCACTGCTGATCTCGTGGTAATGATCCTTCCGCTGTCTC10.12077294685990338No Hit
CCTCGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTCG10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATTTAATTAAAAGCAAGAATT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGTCTCGGAGATGTGGTAATGATC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGAATAAAAGCAGAGAC10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTGTAAATAAAAGCAAGGACTTT10.12077294685990338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGAAAGGACT10.12077294685990338No Hit
AGCCTAGACACCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT10.12077294685990338No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)