FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi716.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi716.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT9722.401847575057737No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC6414.780600461893764No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT4811.085450346420323No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACT255.773672055427252No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT204.618937644341801No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT173.9260969976905313No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGATTGAAAGCAAAGACT163.695150115473441No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT163.695150115473441No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAAGACT143.233256351039261No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT143.233256351039261No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT112.5404157043879905No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT102.3094688221709005No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT40.9237875288683602No Hit
AGCCTAGACATCCACTGCTGTCGGCGCGCAGTGGTAATGATCCTTCCGCT40.9237875288683602No Hit
AGCCTAGACATCCACTGCTGTCTCTGTGGTAATGATCCTTCCGCTGTCTC40.9237875288683602No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT40.9237875288683602No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTGATTGAAAGCAAAGACT20.4618937644341801No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTTCAAAGCAAGAACT20.4618937644341801No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.4618937644341801No Hit
ACGAACGATTCTACGGGCTGGGATAAGAGTATAAGTTAATGGCCATAAGC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAGGAACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTAATTAAAACCAAAGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTCAAAGCAAGAACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATATCTAGTTAAAAGCGAGAACT10.23094688221709006No Hit
AGCCTAGACATCCACTGTTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGATCGAAAGCAAAGACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTGAACGCAAAAACTTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAGGCAAGAACT10.23094688221709006No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.23094688221709006No Hit
TGAGTAACCGCACCATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.23094688221709006No Hit
ATCCTCTACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAATGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGATGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTACGCTGTCTCTTATAC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCCCTTATAC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATTCTTCCGCTGTCTCGTATAC10.23094688221709006No Hit
AGCCTAGACATCAACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTTAAAAGCAAAGACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTGATTGAAAGCAAAGACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCAGCTGTCTCTTATAC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGAAAGGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCACTGTCTCT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT10.23094688221709006No Hit
AGCCTAGACATCCATGCTGTGGTAATGATCCTTCCGCTGTCTCTCATACA10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGATGGAAAGCAAAGACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTACAAGCACGGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTTAAAAGCAAAGACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCCTAT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAAAGCAAGGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGAATT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTAGTTATCTGATTGAAAGCAAAGACT10.23094688221709006No Hit
AGCCTAGACATCCCTGCTGAAAGTAGTTATCTGATTGAAAGCAAAGACTT10.23094688221709006No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.23094688221709006No Hit
GCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGGTTAAAACCAAAGAATT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTCT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACCT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTAAGTTGTTGTAAATAAAAGCAAGGACTTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCACTGTCTCTTATAC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGGTAATGATCCTTCCGCTGTCTCTTATACAC10.23094688221709006No Hit
AGCCTAGACATCCACTTCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.23094688221709006No Hit
AGTCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTTAGTAAAAGCAAGGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT10.23094688221709006No Hit
ACCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCGAGAACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT10.23094688221709006No Hit
AGCCTAGACATCCACTGTTGAAAGCTGTTATCTAGTAAGATCAAGGTCTT10.23094688221709006No Hit
AGCCTAGACATCCTCTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTGTAAATAAAAGCAAGGACTTC10.23094688221709006No Hit
AGCCTAGACACCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAA10.23094688221709006No Hit
AGACTAGAAATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTCT10.23094688221709006No Hit
AGCCTAGACATCCACTGATGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTTTCTAGTTCAAAGCAAGAACT10.23094688221709006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAACGCAAGAACT10.23094688221709006No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)