FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi710.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi710.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2153
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT97745.37854156990247No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC36416.90664189503019No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT703.251277287505806No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC482.2294472828611243No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGCCTT381.7649790989317231No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAAAGCAAGGACTT190.8824895494658616No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC140.6502554575011612No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT130.603808639108221No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT100.46446818392940087No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTACAAGCAAGGACTT90.41802136553646074No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTCGTAAAAGCAAGGACTT90.41802136553646074No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGTAAAAGCAAGGACTT90.41802136553646074No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAAAGCAAGGACTT80.3715745471435207No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACCT80.3715745471435207No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCCAGGACTT80.3715745471435207No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA80.3715745471435207No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT70.3251277287505806No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT70.3251277287505806No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAAAGCAAGGACTT60.27868091035764053No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT60.27868091035764053No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT60.27868091035764053No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT60.27868091035764053No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTCTCTAGTAAAAGCAAGGACTT50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGAATAAAAGCAGAGAC50.23223409196470043No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAATCAAGGACTT50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAA50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTCAAAGCAAGGACTT50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAACAGCAAGGACTT50.23223409196470043No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGCAAGTTGTTATCTAGTAAAAGCAAGGACTT50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAAAGCAAGGACTT50.23223409196470043No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGCAGAGAC40.18578727357176034No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC40.18578727357176034No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGAACTT40.18578727357176034No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.18578727357176034No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGAATAAAAGCAGAGAC40.18578727357176034No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGAAGCAAGGACTT40.18578727357176034No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT40.18578727357176034No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATCAAAGCAGAGAC40.18578727357176034No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGAATT40.18578727357176034No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAAAGCAAGGACTT30.13934045517882027No Hit
AGCCTAAACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.13934045517882027No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTT30.13934045517882027No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAAAGCAAGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT30.13934045517882027No Hit
AACCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGGC30.13934045517882027No Hit
AGCCTAGACATCCCCTGCTGAACGTTGTTATCTAGTAAAAGCAAGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGCC30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTAAAAGCAAGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTAAAAGCAAGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGAC30.13934045517882027No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGAC30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAAAGCAAGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCACGGACTT30.13934045517882027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCGAGGACTT30.13934045517882027No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)