FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi698.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi698.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1961
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT149776.33860275369709No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC311.580826109127996No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA311.580826109127996No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC251.2748597654258031No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT251.2748597654258031No Hit
AGCCTAGACATCCACTGCTGGAGTGGTAATGATCCTTCCGCTGTCTCTTA231.1728709841917389No Hit
AGCCTAGACATCCACTGCTGACGACGACGTGGTAATGATCCTTCCGCTGT170.8669046404895462No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT110.5609382967873533No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT100.5099439061703213No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT80.407955124936257No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC80.407955124936257No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT80.407955124936257No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCTAAAAGCAAGGACT70.35696073431922487No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTACAAGCAAGGACT60.3059663437021928No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.3059663437021928No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGGCT60.3059663437021928No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.3059663437021928No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT50.25497195308516063No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTGAAAGCAAGGACT50.25497195308516063No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT50.25497195308516063No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAAGGACT50.25497195308516063No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTTAAAAGCAAGGACT50.25497195308516063No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT50.25497195308516063No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAGAGCAAGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAATTAAAAGCAAGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTTAAAAGCAAGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACA40.2039775624681285No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT40.2039775624681285No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT40.2039775624681285No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAGAAGCAAGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTTAAAAGCAAGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAGGACT40.2039775624681285No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTCAAAAGCAAGGACT30.1529831718510964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTAATCTAGTTAAAAGCAAGGACT30.1529831718510964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTCAAAGCAAGGACT30.1529831718510964No Hit
AGCCTAGACATCCATGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACTT30.1529831718510964No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA30.1529831718510964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGTAAGGACT30.1529831718510964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTTAAAAGCAAGGACT30.1529831718510964No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT30.1529831718510964No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACTT20.10198878123406425No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10198878123406425No Hit
AGCCTAAACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10198878123406425No Hit
AGCCTAGACATCCGCTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10198878123406425No Hit
GAGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGAC20.10198878123406425No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAATGCAAGGACT20.10198878123406425No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAATGACT20.10198878123406425No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTTAAAAGCAAGGACT20.10198878123406425No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATCTAGTTAAAAGCAAGGACT20.10198878123406425No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACTT20.10198878123406425No Hit
AGCCTAGACATCCACTGCTGTAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10198878123406425No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGAAAGGACT20.10198878123406425No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)