FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi696.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi696.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4845
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT394081.32094943240455No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC501.0319917440660475No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT440.9081527347781218No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCGAAAACTTT220.4540763673890609No Hit
AGCCTAGAAATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT210.43343653250773995No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTAAACGCAAAAACTTT200.41279669762641896No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT200.41279669762641896No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAGAAACTTT200.41279669762641896No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACCTT200.41279669762641896No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTC190.39215686274509803No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTAAACGCAAAAACTTT180.37151702786377705No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTAAACGCAAAAACTTT180.37151702786377705No Hit
AGCCTAGACATCAACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT170.3508771929824561No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTAAACGCAAAAACTTT160.3302373581011352No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTAAACGCAAAAACTTT150.30959752321981426No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTAAACGCAAAAACTTT150.30959752321981426No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTAAACGCAAAAACTTT140.2889576883384933No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT130.26831785345717235No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAGACGCAAAAACTTT130.26831785345717235No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAGCGCAAAAACTTT130.26831785345717235No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTCT130.26831785345717235No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT110.22703818369453044No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAGACTTT100.20639834881320948No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTAAACGCAAAAACTTT100.20639834881320948No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAGAACTTT100.20639834881320948No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTAAACGCAAAAACTTT100.20639834881320948No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT100.20639834881320948No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT100.20639834881320948No Hit
AGCATAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT100.20639834881320948No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT100.20639834881320948No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAGCTTT80.1651186790505676No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGAAAGTAAACGCAAAAACTTT70.14447884416924664No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTAAACGCAAAAACTTT70.14447884416924664No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAACAACTTT70.14447884416924664No Hit
AGCCTAGACATCCACTGCTGTAAGTTTGTGGAAGTAAACGCAAAAACTTT70.14447884416924664No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCAAACGCAAAAACTTT70.14447884416924664No Hit
AGCCTAGACATCCACTGCTGAAAGTTTATGGAAGTAAACGCAAAAACTTT60.12383900928792571No Hit
AGTCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT60.12383900928792571No Hit
AGCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTTC60.12383900928792571No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACACAAAAACTTT60.12383900928792571No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAACCTTT60.12383900928792571No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTACACGCAAAAACTTT50.10319917440660474No Hit
AGCCTAGACATCCATTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT50.10319917440660474No Hit
AGCCTAGATATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT50.10319917440660474No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACTCAAAAACTTT50.10319917440660474No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)