FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi695.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi695.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1222
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT102884.12438625204582No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC70.5728314238952537No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT70.5728314238952537No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAGAAGCAAGGACT70.5728314238952537No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCTAAAAGCAAGGACT60.4909983633387889No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT60.4909983633387889No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT60.4909983633387889No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC60.4909983633387889No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.4909983633387889No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTGAAAGCAAGGACT50.4091653027823241No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT50.4091653027823241No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTTAAAAGCAAGGACT50.4091653027823241No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTTAAAAGCAAGGACT50.4091653027823241No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTTAAAAGCAAGGACT40.32733224222585927No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC40.32733224222585927No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT40.32733224222585927No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAGAGCAAGGACT30.24549918166939444No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT30.24549918166939444No Hit
AGCCTGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACTT30.24549918166939444No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAACAAGGACT30.24549918166939444No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAGGACT30.24549918166939444No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT20.16366612111292964No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTACAAGCAAGGACT20.16366612111292964No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTCAAAAGCAAGGACT20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTCAAAGCAAGGACT20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGCAAGGACTT20.16366612111292964No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCACGGACT20.16366612111292964No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.16366612111292964No Hit
AGCCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGAC20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAATCAAGGACT20.16366612111292964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGGCT20.16366612111292964No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)