FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi692.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi692.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences538
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT27450.92936802973978No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC9217.100371747211895No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT458.364312267657994No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC132.41635687732342No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCTTCCGCTGTCTCTTAT71.3011152416356877No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT61.1152416356877324No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA50.929368029739777No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATTGATTAAAACCAAAGACTT30.5576208178438662No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT30.5576208178438662No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTGATTAAAACCAAAGACTT30.5576208178438662No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT30.5576208178438662No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCGATTAAAACCAAAGACTT30.5576208178438662No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACTGATTAAAACCAAAGACTT30.5576208178438662No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA30.5576208178438662No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT20.37174721189591076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC20.37174721189591076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGAATAAAAGCAGAGAC20.37174721189591076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAGGACTT20.37174721189591076No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC20.37174721189591076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACCT20.37174721189591076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAGACCAAAGACTT20.37174721189591076No Hit
AGCCTAGACATCCACTGCTGAAAGTAGTTATTGATTAAAACCAAAGACTT20.37174721189591076No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCACAGACTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCATAGACTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGTAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAAGGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATCAAAACCAAAGACTT10.18587360594795538No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTC10.18587360594795538No Hit
AGCCTAGACATACACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.18587360594795538No Hit
AGCCTAGACATCCATGCTGAAAGTTGTTATTGATTAAAACCAAAGACTTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAAATGTTATTGATTAAAACCAAAGACTT10.18587360594795538No Hit
AGCCTAGACATCACTGCTGAGTGGTAATGATCCTTCCGCTGTCTCTTATA10.18587360594795538No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18587360594795538No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAGAGACTT10.18587360594795538No Hit
ACACCGTGGAGGCCGCCAGAGACCGCGTACCCGCCGCCGCCGAACTTGCC10.18587360594795538No Hit
AGCCTAGACATACACTGCTGAAGGGTGTTAGGGATTACCAGAACAGAAGG10.18587360594795538No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATACAAGCAGAGCC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTTTAT10.18587360594795538No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT10.18587360594795538No Hit
ACGCCATGCAAGCCGCCAGAGACGGCGTAGCCACCGCCACCGAACTTTCC10.18587360594795538No Hit
AAGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACT10.18587360594795538No Hit
GCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGACT10.18587360594795538No Hit
AATCCATGCAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAGAACCAAAGACTC10.18587360594795538No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAGACTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAAAGAC10.18587360594795538No Hit
TGAGTAACCACAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.18587360594795538No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATTGATTAAAACAAAGGCCTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCCCTTA10.18587360594795538No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTTTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGCC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGTAAGTTGTTATTGATTAAAACCAAAGACTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGTCACGTGGTAATGATCCTTCCGCTGTCTCT10.18587360594795538No Hit
TGAGTAACCTCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGAGTT10.18587360594795538No Hit
AGCCTAGATATCCACTGCTGAGTGGTAATGATCGTTCCGCTGTCTCTTAT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGGC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACAAAAGACTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGAGACTTT10.18587360594795538No Hit
AGACTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTGTAAATAAAAGCAAGGACTTT10.18587360594795538No Hit
GAGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACT10.18587360594795538No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.18587360594795538No Hit
ATCCTATACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATGAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGGTGTGGTAATGATCCTTCCGCTGTCTCTTA10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAGAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAACAGCAAGGACTTT10.18587360594795538No Hit
AGACTAGACAAACTCTGATAAAAGTAGACTTACCTAACAACAACAGCCAT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGATTT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCTTCCGCTGTCGCTTAT10.18587360594795538No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGAATAAAAGCAGAGAC10.18587360594795538No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTTT10.18587360594795538No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)