FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi691.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi691.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1539
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT61239.76608187134503No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT17511.371020142949966No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTATCTAGTTAAGAGTAAAAACTT1499.6816114359974No Hit
AGCCTAGACATCCACTGCTGGAGATGTGGTAATGATCCTTCCGCTGTCTC593.833658219623132No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC573.7037037037037033No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC483.1189083820662766No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT362.3391812865497075No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC352.2742040285899936No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT301.949317738791423No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCTTCCGCTGTCTCTTAT251.6244314489928524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT221.4294996751137101No Hit
AGCCTAGACATCCACTGCTGTGTATAAGAGACAGTGGTAATGATCCTTCC181.1695906432748537No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC171.1046133853151396No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA150.9746588693957114No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTAAAAGCAGGGACTT80.5198180636777128No Hit
AGCCTAGACATCCACTGCTGGGTCTCGTGGGCTCGGAGATGTGGTAATGA50.3248862897985705No Hit
AGCCTAGATATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT40.2599090318388564No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT40.2599090318388564No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCATGGACTT40.2599090318388564No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGAGACTT40.2599090318388564No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT30.1949317738791423No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTAAAAGCAGGGACTT30.1949317738791423No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC30.1949317738791423No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTATCTAGTTAAGAGTAAAAACTT30.1949317738791423No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT30.1949317738791423No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGCCTT30.1949317738791423No Hit
AGCCTAGACATCCACTGCTGGTATCGTGGTAATGATCCTTCCGCTGTCTC30.1949317738791423No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTATCTAGTTAAGAGTAAAAACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTAAAAGTTGCTATCTAGTAAAAGCAGGGACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGTAGAGACT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTTACTATCTAGTTAAAAGCAGAGACT20.1299545159194282No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTATCTAGTTAAGAGTAAAAACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTAAAAGCAGGGACTT20.1299545159194282No Hit
AGCATAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATCTAGTAAAAGCAGGGACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAGGGACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACCT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTC20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATCTAGTTAAAAGCAGAGACT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTACAAGCAGGGACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTATCTAGTTAAGAGTAAAAGCTT20.1299545159194282No Hit
AGCCTAGACATCCACTGATGAAAGTTGCTATCTAGTAAAAGCAGGGACTT20.1299545159194282No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGGCTT20.1299545159194282No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)