FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi685.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi685.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5639
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT446579.18070579890052No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT520.9221493172548324No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAGGCAAGGACTTT370.6561447065082462No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTCT360.6384110657918071No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTGTAAATAAAAGCAAGGACTTT340.6029437843589289No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTGTAAATAAAAGCAAGGACTTT280.49654194006029434No Hit
AGCCTAGACATCCACTGCTGGAGTGGTAATGATCCTTCCGCTGTCTCTTA260.4610746586274162No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGGGACTTT260.4610746586274162No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACCTT250.4433410179109771No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTGTAAATAAAAGCAAGGACTTT240.425607377194538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAGAAGCAAGGACTTT230.407873736478099No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTAAATAAAAGCAAGGACTTT210.3724064550452208No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAGAGCAAGGACTTT200.35467281432878167No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT190.33693917361234266No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTGAATAAAAGCAAGGACTTT180.31920553289590353No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAGTAAAAGCAAGGACTTT170.30147189217946446No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTAAATAAAAGCAAGGACTTTCGT170.30147189217946446No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAAGCAAGGACTTT170.30147189217946446No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATCAAAGCAAGGACTTT160.28373825146302534No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGGCTTT160.28373825146302534No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCGAGGACTTT160.28373825146302534No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC150.26600461074658627No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTAATAATAATCCAATTTACCCAG150.26600461074658627No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAGATAAAAGCAAGGACTTT150.26600461074658627No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT150.26600461074658627No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT140.24827097003014717No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATACAAGCAAGGACTTT130.2305373293137081No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT130.2305373293137081No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTGTAAATAAAAGCAAGGACTTT130.2305373293137081No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT120.212803688597269No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTC110.19507004788082993No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT110.19507004788082993No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT110.19507004788082993No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTGTAAATAAAAGCAAGGACTTTC110.19507004788082993No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTGTAAATAAAAGCAAGGACTTT100.17733640716439084No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATGAAAGCAAGGACTTT90.15960276644795177No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT90.15960276644795177No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAATAAAAGCAAGGACTTTC90.15960276644795177No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT80.14186912573151267No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGAACTTT80.14186912573151267No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTGTAAATAAAAGCAAGGACTTT70.12413548501507359No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGATTTT70.12413548501507359No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAACTAAAAGCAAGGACTTT70.12413548501507359No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGCAAATAAAAGCAAGGACTTT60.1064018442986345No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAACGCAAGGACTTT60.1064018442986345No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCATGGACTTT60.1064018442986345No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAATGACTTT60.1064018442986345No Hit
AGCCTAGACATCCACTGCTGTAAGTTGTTGTAAATAAAAGCAAGGACTTT60.1064018442986345No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)