FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi683.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi683.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7729
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT310640.186311295122266No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTT202126.148272739034805No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT104913.572260318281796No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT921.190322163281149No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT430.5563462284901022No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATGGATTAAAACCAAAAACTT370.4787165221891577No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC340.4399016690386855No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA330.42696338465519473No Hit
AGCCTAGACATCCACTGCTGCCGAGTGGTAATGATCCTTCCGCTGTCTCT280.362271962737741No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAGCTTT250.32345710958726875No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTGAACGCAAAAACTTT240.31051882520377794No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGCAAGAACTT200.25876568766981495No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACCTT180.23288911890283348No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGAACT170.21995083451934275No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACTGTAGACTT160.20701255013585196No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATGGATTAAAACCAAAAACTT160.20701255013585196No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATGGATTAAAACCAAAAACTT140.1811359813688705No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAACTTT140.1811359813688705No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT140.1811359813688705No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAGCGCAAAAACTTT140.1811359813688705No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACCT140.1811359813688705No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAGCCAAAAACTT130.16819769698537976No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACT130.16819769698537976No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTGAACGCAAAAACTTT130.16819769698537976No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTC120.15525941260188897No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTGAACGCAAAAACTTT120.15525941260188897No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT120.15525941260188897No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAGACCAAAAACTT120.15525941260188897No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTCT110.14232112821839824No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTT110.14232112821839824No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTGAACGCAAAAACTTT110.14232112821839824No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCGAAAACTTT110.14232112821839824No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACACAAAAACTTT100.12938284383490747No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTGAACGCAAAAACTTT100.12938284383490747No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTGAACGCAAAAACTTT100.12938284383490747No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCGAACGCAAAAACTTT100.12938284383490747No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT100.12938284383490747No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTGAACGCAAAAACTTT100.12938284383490747No Hit
AGCCTAGACATCAACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT90.11644455945141674No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATGGATTAAAACCAAAAACTT90.11644455945141674No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATGGATTAAAACCAAAAACTT90.11644455945141674No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAGAAACTTT90.11644455945141674No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTT90.11644455945141674No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTC90.11644455945141674No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTGAACGCAAAAACTTT90.11644455945141674No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAACAACTTT80.10350627506792598No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAGAACTTT80.10350627506792598No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAGAGCAAGAACT80.10350627506792598No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTGGATTAAAACCAAAAACTT80.10350627506792598No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACGGATTAAAACCAAAAACTT80.10350627506792598No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)