FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOChi671.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOChi671.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1859
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT76841.31253362022593No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT70237.76223776223776No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC271.4523937600860677No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT221.183431952662722No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT170.914470145239376No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC160.8606777837547067No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCGGAGACT90.48413125336202256No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTTAAAAGCAGAGACT80.43033889187735336No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAGAGCAGAGACT80.43033889187735336No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTTAAAAGCAGAGACT70.37654653039268426No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT60.32275416890801506No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT50.26896180742334586No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAGGCAGAGACT50.26896180742334586No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTACAAGCAGAGACT40.21516944593867668No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC40.21516944593867668No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC40.21516944593867668No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT40.21516944593867668No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACC40.21516944593867668No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT40.21516944593867668No Hit
AGCCTAGACATCCACTGCTGAAAGTTACTATCTAGTTAAAAGCAGAGACT40.21516944593867668No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGGCT40.21516944593867668No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTTAAAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTAGCTATCTAGTTAAAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCCAGTTAAAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATCTAGTTAAAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGCTAAAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTTAAAAGCAAGGACT30.16137708445400753No Hit
AGCCTAGACATTCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAGAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCCATCTAGTTAAAAGCAGAGACT30.16137708445400753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGCCT30.16137708445400753No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT30.16137708445400753No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.16137708445400753No Hit
AGCATAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.10758472296933834No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAGAGCAAGGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCTAAAAGCAAGGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAGTTAAAAGCAGAGACT20.10758472296933834No Hit
AGCCTAGATATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.10758472296933834No Hit
AGTCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT20.10758472296933834No Hit
AGCCTAGACATCCATGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACTT20.10758472296933834No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.10758472296933834No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACA20.10758472296933834No Hit
AGCCTAGACATCCCTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACTT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGTAAGTTGCTATCTAGTTAAAAGCAGAGACT20.10758472296933834No Hit
AGCCTAGACTCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACTT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTTAAAAGCAAGGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTATAAGCAGAGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGGGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT20.10758472296933834No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAGAAGCAAGGACT20.10758472296933834No Hit
AGCCTAGACATCCACGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACTT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAATCAGAGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTTAAAAGCAAGGACT20.10758472296933834No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAGGACT20.10758472296933834No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)