FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOATH660.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOATH660.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2514
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT96038.18615751789976No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT89735.68019093078759No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1114.41527446300716No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT522.0684168655529036No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT361.431980906921241No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC301.1933174224343674No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT170.6762132060461415No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAATTAAAAGCAAGAATT100.3977724741447892No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATTTAATTAAAAGCAAGAATT100.3977724741447892No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATC90.35799522673031026No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT80.31821797931583135No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT70.27844073190135243No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT70.27844073190135243No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATTTAATTAAAAGCAAGAATT70.27844073190135243No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT60.23866348448687352No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAATAGCAAGAATT60.23866348448687352No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAACTAAAAGCAAGAATT60.23866348448687352No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT60.23866348448687352No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATTTAATTAAAAGCAAGAATT60.23866348448687352No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATTTAATTAAAAGCAAGAATT50.1988862370723946No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGCCTT50.1988862370723946No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC50.1988862370723946No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.15910898965791567No Hit
AGCCTAGACATCCATGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT40.15910898965791567No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGGATT40.15910898965791567No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT40.15910898965791567No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAGGAATT40.15910898965791567No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACTTAATTAAAAGCAAGAATT40.15910898965791567No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAGTT40.15910898965791567No Hit
AGCCTAGACATCCACTGCTGAAAGTAGCTATTTAATTAAAAGCAAGAATT40.15910898965791567No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT40.15910898965791567No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT40.15910898965791567No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT30.11933174224343676No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT30.11933174224343676No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAGAAGCAAGAATT30.11933174224343676No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTCGTAAGAGCAAGGACTT30.11933174224343676No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAGAGCAAGGACTT30.11933174224343676No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAGAGCAAGGACTT30.11933174224343676No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT30.11933174224343676No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTTAGTAAGAGCAAGGACTT30.11933174224343676No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)