FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOATH610.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOATH610.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1763
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT78744.63981849120817No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT27515.598411798071469No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT19711.174134997163925No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTTGATTAAAACTAAAACTTT1619.132161089052751No Hit
AGCCTAGACATCCACTGCTGACGACGACGTGGTAATGATCCTTCCGCTGT170.9642654566080544No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA140.7941009642654565No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC130.737379466817924No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC110.6239364719228588No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT70.39705048213272826No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC70.39705048213272826No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGAAGCAAGGACTT70.39705048213272826No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAAAGCAAGGACTT70.39705048213272826No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTGAACGCAAAAACTTT70.39705048213272826No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACCT50.28360748723766305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAAAGCAAGGACTT50.28360748723766305No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.28360748723766305No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAAAGCAAGGACTT40.22688598979013047No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCATAAACTTT40.22688598979013047No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTT40.22688598979013047No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAAAGCAAGGACTT40.22688598979013047No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAAAGCAAGGACTT30.17016449234259784No Hit
AGCCTAGACATCCACTGCCGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.17016449234259784No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT30.17016449234259784No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT30.17016449234259784No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACCTT30.17016449234259784No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.17016449234259784No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTCT30.17016449234259784No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT30.17016449234259784No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT30.17016449234259784No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.17016449234259784No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAAAGCAAGGACTT30.17016449234259784No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTGTAAATAAAAGCAAGGACTTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGCTGATTAAAACTAAAACTTT20.11344299489506524No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCGAACGCAAAAACTTT20.11344299489506524No Hit
AGCCTAGACATCCATGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTT20.11344299489506524No Hit
AGTCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTACAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTATCTAGTAAAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGTAAGTTGTTATCTAGTAAAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGCCTT20.11344299489506524No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAATCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTCGTAAAAGCAAGGACTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTTGATTAAAACTAAAACCTT20.11344299489506524No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAGAAACTTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTTGATTAAAACTAAAGCTTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAACTAAAAGCAAGGACTTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTTGATTAAAACTAGAACTTT20.11344299489506524No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCGAGGACTT20.11344299489506524No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)