FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOATH606.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOATH606.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5244
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT373171.14797864225781No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT65612.509534706331046No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC240.4576659038901602No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT210.40045766590389015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT200.38138825324180015No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT200.38138825324180015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAGAAGCAAGGACT200.38138825324180015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCTAAAAGCAAGGACT190.36231884057971014No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT190.36231884057971014No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTACAAGCAAGGACT170.32418001525553014No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT160.30511060259344014No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT160.30511060259344014No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAGAGCAAGGACT150.2860411899313501No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGGCT150.2860411899313501No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTTAAAAGCAAGGACT140.26697177726926014No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT140.26697177726926014No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT130.24790236460717008No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT120.2288329519450801No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTTAAAAGCAAGGACT120.2288329519450801No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT120.2288329519450801No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA120.2288329519450801No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT120.2288329519450801No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT120.2288329519450801No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT110.2097635392829901No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT110.2097635392829901No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTTAAAAGCAAGGACT100.19069412662090007No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAGGACT90.17162471395881007No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT80.15255530129672007No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT80.15255530129672007No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT80.15255530129672007No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAAGACT70.13348588863463007No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTAAAAGCAGGGACTT70.13348588863463007No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTTAAAAGCAAGGACT70.13348588863463007No Hit
GAGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGAC60.11441647597254005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGTAAGGACT60.11441647597254005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTTAAAAGCAAGGACT60.11441647597254005No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.11441647597254005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTCAAAAGCAAGGACT60.11441647597254005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTGAAAGCAAGGACT60.11441647597254005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTCAAAGCAAGGACT60.11441647597254005No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.11441647597254005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTC60.11441647597254005No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)