FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITS-OOATH588.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITS-OOATH588.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT5755.88235294117647No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT1211.76470588235294No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT87.8431372549019605No Hit
AGCCTAGACATCCACTGCTGCCGGTGGTAATGATCCTTCCGCTGTCTCTT54.901960784313726No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGGCTT21.9607843137254901No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAACTT21.9607843137254901No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.9803921568627451No Hit
AGCCTGGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT10.9803921568627451No Hit
AGCTTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT10.9803921568627451No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGAAGAATTT10.9803921568627451No Hit
TGAGTAACCGCAACATAGTGAACATGTTCGACGCTGACTCATCCTTTCTC10.9803921568627451No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTAAAAGT10.9803921568627451No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATCAAAACCAAAGACTT10.9803921568627451No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAAGTTACACACAAGAATT10.9803921568627451No Hit
AGCCTAGACATCCACTGCTGTCGGTGGTAATGATCCTTCCGCTGTCTCTT10.9803921568627451No Hit
CGCCTAGACATCCACTGCTTAAAGTTGTTATTTATTAAATCCAAAGACTT10.9803921568627451No Hit
AGCCTAGACATCCACTGCTGAAGGTTGGTATCTAGAATAAAAGCAGAGAC10.9803921568627451No Hit
GAGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAAT10.9803921568627451No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.9803921568627451No Hit
ACTCCGTGGAAGCCGCCGGACACCTTGTACGCGTTGTCGTCCGACGTGTT10.9803921568627451No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT10.9803921568627451No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT10.9803921568627451No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)