FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve284.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve284.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2912
Sequences flagged as poor quality0
Sequence length301
%GC68

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGGAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.1717032967032967No Hit
ACGCCGTGGAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.1717032967032967No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC40.13736263736263737No Hit
ACGCCATGCAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.10302197802197803No Hit
ACGCCGTGGAGGCCGCCGGAGGTTTCGTAAGCCTTGGAATCGAATTTGCC30.10302197802197803No Hit
ACGCCGTGTAGGCCGCCTGAGACCTTGTAGGCGTTCTCGTCGTTGGTGTT30.10302197802197803No Hit
ACCCCGTGTAGTCCGCCTGAGGTTTCGTAAGCCTTGGAATCGAATTTGCC30.10302197802197803No Hit
ACGCCGTGGAAGCCGCCAGAGGTTTCGTAAGCCTTGGAATCGAATTTGCC30.10302197802197803No Hit
ACGCCATGCAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.10302197802197803No Hit
ACTCCGTGAAAGCCGCCAGACACCGCGTAGGAGTCCGAGTCGAACTTGCC30.10302197802197803No Hit
ACGCCGTGTAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.10302197802197803No Hit
ACGCCGTGCAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.10302197802197803No Hit
ACGCCGTGGAAGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.10302197802197803No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)