FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve280.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve280.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1726
Sequences flagged as poor quality0
Sequence length301
%GC69

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGAAACCTTGTAGGAGTTCTGGTCGAACTTACC40.2317497103128621No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.2317497103128621No Hit
ACTCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.17381228273464658No Hit
ACGCCGTGAAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.17381228273464658No Hit
ACGCCATGTAGTCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACACCATGAAGGCCGCCGGAGGTCTTGTAGGCCGACTCCTCGTCGTGCTC20.11587485515643105No Hit
ACGCCGTGGAGGCCGCCGGACACCTTGTAAGAGTTATCGTCGAACTTACC20.11587485515643105No Hit
ACGCCATGTAAGCCGCCTGAGACCTTGTACGCGTTCTCGTCCGAGGTGTT20.11587485515643105No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.11587485515643105No Hit
ACGCCGTGGAGGCCGCCTGAGGTCTCATAGACCTTCGAGTCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGAAATCCACCTGAGGTCTCGTAGACCTTCGAATCGAACTTACC20.11587485515643105No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGGAAGCCGCCCGAGACCTTGTACGCGTTCTCGTCCGAAGTGTT20.11587485515643105No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACACCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACACCGTGCAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAGCCGCCGCCGAACTTGCC20.11587485515643105No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.11587485515643105No Hit
ACGCCGTGCAAACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACTCCGTGGAAGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACTCCGTGGAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACTCCGTGCAGGCCGCCGGAGACCTTGTAGCCGCCGCCGTCGCCGAACTT20.11587485515643105No Hit
ACACCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCATGAAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGGAGGCCGCCTGACACCTTGTAAGAGTTATCGTCGAACTTACC20.11587485515643105No Hit
ACACCGTGAAAGCCGCCCGAGACCTTGTACGCGTTCTCGTCCGAGGTGTT20.11587485515643105No Hit
ACGCCGTGCAGGCCACCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCATGGAGGCCACCGGACACCTTGTAGGCGTTCGAATCATTGGTGTT20.11587485515643105No Hit
ACGCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGAAAACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACCCCGTGGAATCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACACCGTGCAGGCCGCCCGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.11587485515643105No Hit
ACGCCATGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCATGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGGAAGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCATGAAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACGCCGTGGAATCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.11587485515643105No Hit
ACCCCGTGCAGGCCGCCCGAGACCTTGTACGCATTCTCGTCGTTGGTGTT20.11587485515643105No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)