FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve277.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve277.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3944
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.3042596348884381No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.2535496957403651No Hit
ACTCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.2281947261663286No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.2281947261663286No Hit
ACGCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.2028397565922921No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.2028397565922921No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.2028397565922921No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.17748478701825557No Hit
ACCCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.17748478701825557No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.17748478701825557No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.17748478701825557No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.15212981744421905No Hit
ACGCCATGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.15212981744421905No Hit
ACTCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.15212981744421905No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.15212981744421905No Hit
ACGCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACGCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACACCGTGGAAACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACTCCGTGTAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACGCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACACCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACTCCATGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACTCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.12677484787018256No Hit
ACTCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACGCCGTGTAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACCCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACTCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACTCCATGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACACCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACTCCATGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACCCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACTCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACGCCATGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACACCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACGCCATGTAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACTCCGTGCAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACGCCGTGTAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACGCCATGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACGCCGTGGAGTCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACCCCGTGGAGTCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACACCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACTCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACTCCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACTCCGTGGAGGCCTCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACACCATGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit
ACGCCGTGAAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.10141987829614604No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)