FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_GyrBDve268.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_GyrBDve268.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2979
Sequences flagged as poor quality0
Sequence length301
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.16784155756965424No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.13427324605572338No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.13427324605572338No Hit
ACTCCATGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.10070493454179255No Hit
ACGCCGTGAAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.10070493454179255No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.10070493454179255No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.10070493454179255No Hit
ACGCCGTGGAGGCCGCCGGACACCTTGTAGGCGTTCGAATCATTGGTGTT30.10070493454179255No Hit
ACCCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.10070493454179255No Hit
ACACCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.10070493454179255No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)